Budorcas taxicolor (takin): 128062899
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Entry
128062899 CDS
T08909
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128062899 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128062899 (EDC4)
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128062899 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
128062899 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
128062899
NCBI-ProteinID:
XP_052511317
LinkDB
All DBs
Position
18:36901674..36912745
Genome browser
AA seq
1403 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAENQRPSNAYNGDLNGLLVPDPLCSGDSA
STNKPGLRAMPPINLQEKQVICLLGDDSSTGIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALINGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRTNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSPVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESSAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPSHP
AHEDFAFPTAFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPSTSLQQIAASPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPALPRPPEELTLSP
KLQLDGGLTMSSSSLQASPRALLPGLLPGPADKLTPKGPGQVPTAASALALELQEVEPLG
LPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGASAPEGLEPDSMASAASALHL
LSPRPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETC
SSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGNFGTK
VPTPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSSLGSRLTEHQVAETPEDWPALIWQQQ
RELAQLRHSQEELLQRLCAQLEGMQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQ
LQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVE
SSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN
DSFRLGTQEYLQQLENHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSGSVRA
EVQHQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAH
LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVL
LSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPH
NSLGKAARRLSLMLHGLMTPSLP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggccggcaggaggccccagtgcagagaaccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgacagtgct
tcaacaaacaagcctggtctccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccactggcattggaattttggccaaggaggtggag
attgtggccagcagtgattctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
attcagcctgtcgccaagtatgactgggagcagaaatactactatggcaacttgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcaatggtg
cgagtgatcagtgtcagcacttcagagcggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacatctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtatggcgcttggccctgattaatggcaaaattcaagaggagatcttggtc
cacatccgccagccagagggcactccactgaaccacttccgcaggatcatctggtgcccc
ttcatccccgaagagagtgaagactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggatatgctccgcaccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ttgagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatctacattgagggacaggatgagccacggtgtttacatgag
tggaagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccccttctggagattcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagcccagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgatcctcagtgatgtacagcggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgggcctgcttcagctcgatctctgagttccttctcacccaccctgta
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacacagaggtgttgcct
gccgaggaggagaatgacagcctcggggccgacgggacccacggagctggtgcgatggag
tcttcagccggcgtgctcatcaagctcttttgtgtgcacactaaggcattacaggatgtc
cagatccgctttcagccacagctgaaccctgacgttgtggccccgctcccctcgcaccct
gcccatgaagactttgccttccccacagcatttggagagtctcggccggagctgggctca
gagggcctgggatcggctgctcatggctcccagcctgacctccgacgtatcgtggagttg
cctgcaccggctgacttcctcagtctgagcagtgagaccaagcccaagctgatgacacct
gacgccttcatgacgcctagcacctccctgcagcagatcgctgcatctcccagtagcagc
agcagcagcagcagtagcagcagcagcagctcctctctcacagccgtgtctgctatgagc
agtacttcggccgtggaccccgccttgcctaggccacctgaggagctgaccttgagcccc
aagctacagctggatggtgggctgaccatgagcagcagcagcctgcaggcaagcccacgt
gcgctcctgcccggcctgctcccaggtccggccgacaaactgactcccaaaggacctggt
caggtgcctactgctgcctctgcactcgccctggagctgcaagaagtggaacccctgggg
ctgcctcaggcttcccccagccgcacccgctcccctgatgttatctcctcagcctccact
gccttgtcccaggacatccctgagatcgcatctgaggcgctgtcccgtggctttggcgcc
tctgctcctgagggcctggagccagacagcatggcctcagcggcctcggcgctccacctg
ttgtctccacggccccggccagggcccgagctcggcccccagcttagcctggatgggggc
cctggggatggggatcggcatagtaccccttccctcctggaggcagccttgacccaggag
gccacagcccctgacagtcaggtctggcctacagctccagacatcactcgcgagacctgc
agcagcctggcagagagcccccggaatggcctccaggaaaagcacaagagcctggctttc
caccgaccaccttatcacttgctgcagcaacacgacagccaggacgccagcgccgagcaa
agtgaccatgatgatgaggtggccagcctcgcctctgctgcagggaactttggcaccaaa
gtgcccactccacgtcttccagccaaggactggaagaccaagggatcccctcgggcctca
cccaagctcaagagaaagggcaaaaaggatgacggggattcatccttgggatcccggctc
acagagcaccaggtggcagaaacccctgaggactggccggcactgatctggcagcagcag
agagagctggcacagctgcggcacagccaagaagagctgctgcagcgcctgtgcgcccag
cttgaaggcatgcagagcactgtcactggccacgtggagcgagccctggagtcgaggcac
gagcaggagcagcggcgactggagcgggccctggccgaggggcagcagcgaggtgggcag
ctgcaggagcagctgacgcagcagctatcccaggcgctgtcttcagcggtggcagggcgg
ctggagcgcagcatacgagacgagatcaagaagacggttcctccatgtgtctcccggagt
ctggagcctgtggctggccagctcagcaactcggtggccaccaaactcacagctgtggag
agtagcatgaaagagaatatctctaagctgctcaagtccaagaacttgacagatgccatt
gcccgagcagccgcagacacattacaggggccaatgcaggctgcctaccgggaagccttc
cagagcgtggtcctgcccgccttcgagaagagctgccaggccatgttccagcagatcaat
gacagcttccgactgggcacacaggagtacttgcagcagttggagaaccacatgaagagc
cgcaaggcacgagagcaggaggcacgggagcccgtgctggcccagctgcggggcctggtc
agcaccctgcagggggccacggagcagatggcggccactgtgtctggcagcgttcgggct
gaggtgcagcaccagctgcacgtggccgtaggcagcctgcaggaggcgattctagcacag
gtacagcgcatcgtgaagggcgaagtgagtgtggctctcaaggagcagcaggccgccgtc
acctctagcatcatgcaggccatgcgctcagctgctggcacacctgtccccgctgcccac
ctcgactgccaagcccagcaagcccatatcctgcagctgctacagcagggccacctcaat
caggccttccagcaggccctgacagctgccgacctgaacctggtgctatacgtgtgtgaa
acagtggacccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactc
ctttctctcatccagcaactggcctctgatcttggcactcgaactgacctcaagctcagc
tacctggaagaggctgtaatgcacctggaccacagtgaccccatcactcgggaccacatg
ggctccgtcatggctcaggtgcgccagaagctcttccagttcctgcaggcggagccacac
aactcacttggcaaagcagcccggcgtctcagcctcatgctgcacggccttatgaccccc
agcctcccttag
DBGET
integrated database retrieval system
