Budorcas taxicolor (takin): 128064148
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Entry
128064148 CDS
T08909
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03015
mRNA surveillance pathway
btax04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128064148 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128064148 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btax03021
]
128064148 (SYMPK)
03019 Messenger RNA biogenesis [BR:
btax03019
]
128064148 (SYMPK)
Transcription machinery [BR:
btax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128064148 (SYMPK)
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128064148 (SYMPK)
U7-dependent histone pre-mRNA processing factors
128064148 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
128064148
NCBI-ProteinID:
XP_052512898
LinkDB
All DBs
Position
18:complement(54628498..54661565)
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AA seq
1272 aa
AA seq
DB search
MAASSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQVEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSSLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGVKGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPEAKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGLGAPSSSSSSSSVRPGPPQPEEAIDFREEGPECETPA
IFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLLSKEERSPQPLTAAGEDTMQTPSPAT
EEAGEPETKGNS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagcagtggggacagcgtcacacgccggagcgtggcatcacagttcttcact
caagaggaggggccgggcatcgatggcatgaccacatcagagagagtggtagatctcctg
aaccaggcagcactgatcaccaacgactcaaagatcacagtgctcaaacaggtgcaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaagtccatcgaagtgcgcaagtttgtcatcggcttcatcgaggaggcttgc
aagcgagacattgagctgctgctgaaactgatcgcgaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggatatg
gtgtcggccatggctggggacatcatcctgctgctggactctgacaatgacggcatccgt
acccatgccatcaagttcgtggagggcctcatcgtcaccctctcgccccgcatggctgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccctgctatctcctccatcaacctgaccacagccctgggctccctg
gccaacattgcccgccagaggcccatgttcatgtcggaggtgattcaggcctatgaaacc
ctccacgccaatctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgaatgtgctgaagcacccagcgtccttggagttccaggctcag
atcaccaccctgctggtggacctgggcacgcctcaggtggagatcgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgagacgactcggattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccctcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacagacatcacagccgaa
ttcctccagcctctgctgacacccgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagcgatctacaccccagtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggccgca
ggactggggccaggtgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgtcctgatcaagcggcgcctgcccgcccagggccaggccatc
tcggtagtgggctccctgagctccatgtcctccctggaggaggaggcgccccaggccaag
aggaggccggagcccattatccccgtcacacagccccggctggcaggcgctggtgggcgc
aagaaaatcttccgcctaagtgatgtgctgaagcccctgacggacgcgcaggttgaggcc
atgaagctaggcgctgtgaagcggatcctgcgggccgagaaggctgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggacgtccgggcccgcctggacctggccttc
gcctggctctaccaggaatacaacgcctaccttgcagctggcgtcaagggcgccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggttgtgctggaggcaccgctgatcaccgagagcgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctccga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac
gaaaaggaacagctgcgagagtacgtggagaagtttgccctcaactacctgcagctcttg
gtccaccccaacccgccgtcggtgctgtttggagccgacaaggacacagaggtggccgca
ccctggactgaggagacggtgaagcagtgcctgtacctctacctggctctcctacctcag
aaccacaagctgatccacgagctggcggccgtgtacacggaggccatcgctgacatcaag
aggacagtgctgagggtcattgaacagccgatccgggggatgggcatgaactcgccagag
ctgctcctgctggtggagaactgtcccaagggggcggagacactggtcacacgctgtctg
cacagcctcacagacaaagtgcccccgtccccagagctggtgaagcgggtcagggatctc
taccacaagcgactgccagatgtccggttcctcatcccagtgctcaatgggctggagaag
aaggaagtgatccaggccctgccaaagctcatcaagctcaaccccatcgtggtgaaagaa
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcagccctgtcccccttg
aaccctggagagctgctcatcgccttacacaacattgactcagcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgctgagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgactatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccggctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggggccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccgc
tccttcaccccccaccagcaagcacacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccagaggctaaggaagcacccgccgggcccctggaagaggatgac
ttggagcctctggccctggcaccacctccggccccccgaccccctcaagatctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcaactggaggaagaacagaagctgaag
cctgggggactgggagccccctcctcgtcctcgtcctcttcctcggtgcggccaggcccc
ccccagccggaggaagccattgatttccgggaggaggggcctgagtgtgagaccccggcc
atcttcatcagcatggacgatgactcggggctgactgaggccgcactgctggactctagt
cttgagggacccctacctaaggaaactgcagcaggtggattgctttcaaaggaggagcgg
agcccccagcccctcacagctgctggagaagacacaatgcagacccccagccctgccact
gaggaagcgggcgaaccggaaaccaaggggaatagctga
DBGET
integrated database retrieval system
