Budorcas taxicolor (takin): 128066154
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Entry
128066154 CDS
T08909
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128066154 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
btax04121
]
128066154 (SLX4)
03400 DNA repair and recombination proteins [BR:
btax03400
]
128066154 (SLX4)
Ubiquitin system [BR:
btax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128066154 (SLX4)
DNA repair and recombination proteins [BR:
btax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128066154 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
128066154
NCBI-ProteinID:
XP_052515202
LinkDB
All DBs
Position
2:39890558..39909683
Genome browser
AA seq
1768 aa
AA seq
DB search
MMDESDDDFQELCASFFQRVKKNGPKEVSKEKKTQKASNGTQIRSKPKRTKPTASKSKTP
QGPTERKTCPGSQVPRTQKHRAPKRPETEPAPPENTEGGVHTSAVLQDSTWSTQTEATTD
SLSQPPPSCLTATAPSPSKPRAAELVLQRMQQFKRADPERLKHASEGCSLEAAPEENVPK
GPQDGMAVNGHIPHECQGSAPATSGCGPGLPATESDTAVALALQQELGQEQASTPDNSLE
ETGLFFCQICQKNLSAMNVTRRQQHVNRCLDEAEKALRFPTPQIPECPLCGKPFLTLKSR
ISHLKQCAVKMEVGPQLLLQAVRLQGAQPAGTSGTPAPSLSDGAGCLKRKGATTKKEPRK
RRKVPEPEAPSEDLLVAMALSRSETEQQAVPAALRLGNAFAERTRLGAEKKTHKKKAPTS
PPQLLVQDAETTGRQIQDRLAQLLSEEVEPSSTPPLPTSRILEEELARGSRALRPPGGAQ
NLLWEASALTGARALESFYTASLVPPLVPQWPAKGLTQEPVRLPQPPKLPELSVGAPASA
PGTHPVSHSLWSPAPSASQRERQALQDLLELAGEGLPASPCSRDLASSGGTAGMDLSLGG
LPLTGFVLPAKEKYPEEGGQASLALGLLVADFSAMVNNPHLSDVQFQTDSGEVLYAHKFV
LYARCPLLMQHVNSEAFLAEEDGDLRRQRVLLRDVSTEAAQAFLHYLYAADTILTPQLAP
DLRSLAQRFGVSELVHLCEQVPFVMDAEGGQAKEQEDDADGRVETFRELLHFVWLGEEEG
AEALLKPEGREEDREKVNEEEMEEIYEFAATQRKLLQGEKAPEPEEEADLLGEDGPVSGE
ILTSEQDKEQPENAEQVESSGPGRDETPATWGNTRQSTLPPPSDQALNGGERAEAPEGAL
APPCSSSPAQGRPERQESAPLCSADDDNVQQPFSSPQAGYSELSRVTSDWEEGNRTIQER
EVEGFHSPAHQQAPPSRSCFFPPQPHQGQSPRQPRPHTRRPNDLSPPILQLQGTASSMAS
QNLSLKPKKARRLPSSREDPGQKDKECSSALECRGKGVLIFPEKSPPMDLTRSGPGRRSS
RPETSPHSMNREDEVILLLDSDEELELEQTKAKSFLNSPLEDKKVLEVSAKSSELFSIID
LDAEQEPPQSPPGSQALLPREVEGRLGASIDDSTTDTSWLVPATPLAGGSCDCSSQTQIT
GLRARPPADPLALPKPRALLENRDEPEATSKFSVIIPQTSSPHLGPAAPGGSDGRRQACS
SPSSPRRRLLPRASPLAPRPILGGLANLPRQLPKCLPPARSPAAQAPVSEVVEVEDSEDE
QEAASQQASSSPLLDGDPPLPAEDWCWHMEPLSPIPIDHLNLERTGPLSTSSPSSRAEGA
PDSRDCHSPALLGTTPIRGSYTGRRKSQEKSSGAGSPGSHRQSFLNSALWDDWNEEDQRS
SEAAPLPQTPRTDGAQRSHKLQTPEGADRKKNLPPKVPITPMPRYSIMETPVLKKELDRF
GVRPLPKRQMVLKLKEIFQYTHQTLESDSENEGQSSQLPLEAPCSQTYTTQTAKASRAAG
HTQLEAPPGRIPQRSKGLAKTKGPQHHKQQPRGSISALSVSPAKEEPLDPGGDAQLPASQ
ESTATSVDSGDSCCSSQSSSCEFGAALESVGEEEAGEEVVSASQVAVQAVATEEAVRRYI
RSQPALYRKVLLYQPVELAELQAELKQQGIHVASGKLLDFLDTQCITFTTAATRKEKLGR
KRRQPAGKKRGRARRPAPHSPVPAVSSL
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgactttcaggaactctgtgccagctttttccaaagggtg
aaaaagaatggccccaaggaagtgtcaaaggaaaagaagacacaaaaggcctccaacggc
acccagataagaagcaaaccaaaaaggaccaaaccaactgcttctaagagcaaaaccccg
caaggccccactgagaggaaaacttgccctggcagccaggtcccacggactcaaaagcac
agggcacccaagaggccagagactgaaccagctccccctgaaaacaccgagggaggtgta
cacacttctgctgtactccaggatagcacatggagcacccagacagaggccaccacggac
agcctctcgcagccccctccttcctgtttgactgcaacggcgccaagtccctccaaaccc
agggcggcagagctggtgctccagcgaatgcagcagttcaagagagcagaccccgagcgc
ttaaaacatgcttccgaaggctgctcgctcgaggctgcacctgaagaaaatgtcccaaag
ggccctcaagatgggatggcggtgaacgggcacatcccacatgagtgccaagggtctgct
ccagcaacatcagggtgtggacccgggctccccgccacagaaagtgacactgcagtggcc
ttggccctccagcaggagcttgggcaggaacaggcgtccacacccgacaacagcctggag
gagacggggttgttcttttgccagatctgtcagaagaacctctcagccatgaacgtgaca
cggaggcagcagcatgtgaaccggtgcttggatgaggctgaaaaggcactgagattcccc
acgcctcagatccctgagtgccccctctgcggcaagccatttctcaccctgaagagcaga
atcagtcacctgaaacagtgtgcggtgaagatggaggttggcccgcagctcctgctccag
gctgtgcgcctgcagggggctcagcccgcgggcacctcgggcactccggcacccagcctc
agcgatggagctggctgtctgaagcggaagggagccaccaccaagaaggagccacggaag
aggcggaaggtccctgagcccgaggcgccctccgaggacctgttggtagccatggctctg
tcccgctcagagacggagcagcaggcggtgccggccgcgctcaggctggggaacgctttt
gcagagaggacgaggctaggagcagagaagaagacccacaagaagaaagcccccacgtcc
cccccacaactgttagtccaggatgcggagaccacgggccggcagatacaggaccgcctg
gcccagctcctgtcggaggaggtggagccgtccagcacgccgccactccccaccagcagg
attctagaggaagagctggccaggggcagccgggccctgcgaccccccgggggggcacag
aacctgctgtgggaggccagtgccctcaccggggctagggccctggagtccttctacacg
gccagcctggtgcctcctctggtgccccaatggcctgccaagggtctcacacaggagccc
gtgcggctgccacagccacccaagctgccagaactgagtgtgggagcacccgcttctgcc
cctggcacccaccccgtgagccacagcctctggagcccagcaccctccgccagccagagg
gagcgccaagccctgcaggatctgctggagctggcgggagaggggttgcctgccagccca
tgcagcagggacctggccagctcagggggcactgcagggatggacttgtcgctcggtgga
cttccactgactgggtttgtcctgccagccaaggagaagtacccggaggagggcggccag
gcttcgctcgcccttggtctgctggtggccgacttcagtgccatggtcaacaaccctcac
ctgagtgacgtccagtttcagacagacagtggggaggtgctctatgcccacaagtttgtg
ctctatgcccgatgcccacttctcatgcagcatgtaaacagtgaagccttcctggccgaa
gaggatggtgacttgaggcgccagcgcgtgctgctgcgtgacgtcagcaccgaggccgcc
caggcattcctgcattacctctatgctgctgacaccatcctgactccccagctggcccct
gacctgcgctctctggcccagaggtttggggtgagtgagcttgttcacctgtgtgaacaa
gtgccctttgtgatggatgcagaaggtggacaggcaaaggagcaggaagacgacgctgac
ggcagagtggagactttccgagagctcctgcactttgtgtggctgggtgaggaggaggga
gcagaggccctgctgaagccggagggccgcgaagaagacagagaaaaggtcaacgaggag
gagatggaagaaatttatgaatttgcagctactcagcgaaagctgctccagggggagaaa
gctccagagccagaggaagaagctgacctgctcggggaggatggtccagtttcgggggaa
atcctcacaagtgaacaggataaagaacagccagaaaatgcagagcaggtggaatcatcc
gggccaggaagagatgagaccccagccacatggggaaacacgagacagtccacacttccg
ccccccagcgaccaggctttgaacgggggagagagagcagaggccccagagggagcactg
gctcctccctgctcctccagccccgcccagggccggccagagaggcaggaaagcgcccct
ctgtgctcagctgatgatgataacgttcagcagcctttttcatcacctcaagctggatac
tctgaactctcccgggtgacgagcgattgggaagaaggaaacaggaccatccaagaaagg
gaggtagaggggttccattcccctgcacaccagcaggcacccccctcacgctcatgcttc
ttcccaccgcagccccatcaaggccagagtcctcgccagccacgtcctcacactcgtcgc
cccaatgacctgtccccaccaatactccagttgcagggcacagcttccagcatggcctcc
cagaacttatcactgaagccaaagaaagccaggcgccttccctcgtcacgtgaggaccca
ggccagaaagacaaggaatgtagttccgcactggaatgcagaggtaaaggggtcctaatc
ttcccagaaaaatctccacccatggatctaacccggtcaggacctggccgccggagctcc
aggcctgagacctctccccacagcatgaacagagaagacgaggtgatcctgttactggat
tcagatgaagagctggagctggagcaaaccaaagcaaagtcatttctgaacagtccctta
gaagacaagaaagttctggaagtcagcgccaagtcctctgaactgttttccatcattgac
ctcgacgcggagcaggagcctccccaaagcccaccaggaagccaggccctgctgccgcgg
gaggtggaggggcggctaggggccagcattgatgacagcaccacggacacctcgtggctc
gtgcccgccaccccgctggctggcgggagctgcgactgctcctcgcagacccagatcaca
ggcctcagggccaggccaccagcagacccgctggctctgcccaagcccagggccctgtta
gagaacagggacgaacccgaagccacgagtaagttttcggtcatcataccccagacgtcg
tccccacacctgggacccgccgctcctggaggctctgacgggagaaggcaggcctgcagc
agcccatccagcccccgccgcaggctcctcccacgtgcttctcctctggctccccggccc
atcttaggaggcctcgccaacctccccaggcagctcccaaagtgcctgcctcctgcgcgg
agcccggcggctcaggctcccgtgagtgaagtggtggaggtggaggacagtgaggacgag
caggaggcagcctcccaacaggcaagcagcagccccctgctggacggtgaccccccgctt
ccagccgaggactggtgctggcacatggagcccctctcaccgatccccattgatcacctg
aacctcgagcggacaggccccttgagcaccagcagccccagcagcagggcagagggtgcc
ccagacagcagagactgccactccccggcactgctgggcaccaccccaatccgagggagc
tacactggccggaggaagtctcaagagaagtcctctggggctggctcccctgggagccac
cggcagagctttctgaactcagctctgtgggatgactggaacgaagaagatcagaggtcc
tcagaggcggctcctctgccccagacgccgcgcacagatggagcccagaggtcacacaag
ttacagacgccagaaggtgctgatcggaagaagaacttgcccccgaaagtgcccataacc
ccaatgccaaggtactccatcatggagactccagtgctgaagaaagagctggacaggttt
ggggtccgccctctgcccaaacgccagatggtcctgaaactgaaggagatattccagtac
actcatcagacgctggagtcagactccgagaacgagggccagtcctcacagctgcccttg
gaggctccctgcagccagacctacaccacccagaccgctaaggcttcaagggcagctggc
cacacccagctggaggcccctcctggccgcattccccagaggtccaagggacttgccaag
accaagggcccccaacatcacaagcagcagcctcgtggcagcatctctgccctgagcgtg
tcaccagccaaggaggagcctttggaccctggtggggacgcccagctcccggcctcgcag
gagtccacggccacgtctgtggacagcggggacagctgctgcagctcgcagagctcatcc
tgtgagtttggagcggccttggagtctgtgggagaagaggaggcaggcgaggaggtggtc
agcgcctcacaggtggccgtccaggcagtggccacagaggaggccgtgcggcgctatatc
cgctcccagccggccctctaccgcaaggtcctgctgtaccagcccgtcgagctggcggag
ctgcaggctgagctaaagcagcagggcatccacgtggcctcggggaagctgctggacttc
ctggacacccagtgcatcaccttcaccacggccgccacccgcaaagagaagcttgggagg
aagaggcggcagcccgcgggcaagaagaggggcagagcccgcaggcccgctcctcactcc
ccagtcccagctgtcagcagcctgtga
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integrated database retrieval system
