Budorcas taxicolor (takin): 128067367
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Entry
128067367 CDS
T08909
Name
(RefSeq) LOW QUALITY PROTEIN: NPC intracellular cholesterol transporter 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
btax04142
Lysosome
btax04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
128067367
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128067367
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
128067367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btax02000
]
128067367
Transporters [BR:
btax02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
128067367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
128067367
NCBI-ProteinID:
XP_052516336
LinkDB
All DBs
Position
22:33705244..33750280
Genome browser
AA seq
1305 aa
AA seq
DB search
MSLRGPALGLLLLLFCPAQVFSQSCIWYGECGIASGDKRYNCRYSGPPNPLPHNGYDLVQ
ELCPGFFFGDVRLCCDVQQLHTLKDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQF
LNVTATEDYVDPTTNETRTNVKELQYYVGERFASAMYNACRDVEAPSSNEKALGLLCGRE
ASACNATNWIEYMFNKDNGQAPFTITPVFSDLPTHGMQPMNNATKGCDESVDEVTGPCSC
QDCSAVCGPKPQPPPPPVPWRILGLDAMYVIMWSTYMAFLLVFFGAFFAVWCYRKRYFVS
EFTPIDGNIPFRVNASDKGGPTCCDPLGAALEAHLRRLFERWGSFCVRHPGCVVFFSVAF
IAACSSGLVFIQVTTDPVDLWSAPGSQARQEKEYFDMHFGPFFRTEQLIIRAPHTPPHTY
EPYPSGADVPFGPPLAIDILHQVLDLQTAIESITASYNHETVTLRDICVAPLSPYNQNCT
VLSVLNYFQNSHSVLDHQVGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEREFINFVKNYENPNLT
ISFKAERSIEDELNRESNSDVFTVLISYGIMFLYISIALGHIKSCRRLLVDSKISLGIAG
VLIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNQLDVLCCVKGAADDTGVQASESCLFRFFRNSYAPLLLKDWMRPLVVA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNQYLHAGPPVYFVLEEGHDYM
STKGQNMVCGGLGCNNDSLVQQVFTAAQLDSYTRIGFAPSSWIDDYFDWVKPQSSCCRIY
NSTEQFCNASVVDPACVRCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYS
AAVNILDNGTSVGATYFMTYHTVLQTSADFIDAMEKARLIANNITRTMNQQGGDHRVFPY
SVFYVFYEQYLTMIDDTVFNLGVSLGAIFLVAVGLLGCELWAAGVMCATIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIIVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKSL
TTQQXYRGTEREQLLSFQLPPHGLETVSAGWLVYPWTATASSRLG
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcggcccagccctcggcctcctcctgctgctgttctgcccggcgcaggta
ttttcacaatcctgcatttggtatggggagtgtggaatcgcatctggagataagagatac
aactgcagatattctgggccaccaaatccattgccacataatggctatgacctagtgcag
gagctctgtccagggttcttctttggcgatgtcaggctttgctgtgatgttcagcagctt
cacacactgaaagacaacctgcagctgcctctgcagtttctgtccagatgtccatcctgt
ttttataacctagtgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaatgttacagcaactgaagattatgtggatcctactacaaatgagacgagaacaaat
gtaaaagaattacagtactatgttggagagcgttttgccagtgccatgtacaacgcctgc
cgggatgtggaggccccctcgagcaacgagaaggccctggggctgctgtgtgggcgtgag
gccagcgcctgcaatgctaccaactggatcgagtacatgttcaacaaggacaatggccag
gcgcccttcaccatcacccctgtcttttcagatcttccgacccatgggatgcagcccatg
aacaatgccaccaagggctgtgacgagtcggtggacgaggtcacggggccatgcagctgc
caggactgctcggctgtctgtggccccaagccccagcccccgccccctcccgttccctgg
agaatcctgggtctcgacgccatgtacgtcatcatgtggagcacctacatggctttcctg
ctcgtgttttttggagcgttctttgctgtgtggtgctacagaaaacggtattttgtctct
gagtttacccccattgatggcaatatacctttccgtgtaaatgccagtgacaaagggggg
ccaacctgctgtgaccctctgggcgccgccttggaggcccatctgcggcggctcttcgaa
cggtggggctccttctgtgtgaggcaccccggctgtgtcgtgttcttctctgtggccttc
atcgccgcctgttcctcaggcctggtgttcatccaggtcacaaccgacccggtggacctc
tggtcggcccccggcagccaggcccgccaggagaaggagtacttcgacatgcactttggg
cccttcttccgcacggagcagctcatcatccgggccccccacaccccgccgcacacatac
gagccctacccctctggagccgacgtgcccttcgggcctcccctcgccatagacattctg
caccaggtccttgacttacaaaccgccatcgagagcatcactgcttcttacaaccacgag
actgtgaccctgcgggacatctgcgtggcgcccctctcgccatacaaccagaactgcacc
gtcctgagcgtgctgaactacttccagaacagccactccgtgctggaccatcaggtcggg
gacgacttcttcgtgtacgcggattaccacacgcacttcctctactgcgtccgggctcct
gcttccctgaatgacaccagtttgctccacgatccttgcctggggacgtttggtggccca
gtgttcccatggcttgtgcttggaggctatgatgatcaaaactacaataacgccacagcc
cttgtgatcacttttcctgtcaataattactataacgatacagagaagctccagagggcc
caggcctgggaaagagagttcattaattttgtgaaaaactacgagaatccaaatctgacc
atttcttttaaggctgaacgaagcattgaagatgaactaaaccgtgaaagtaacagtgac
gtcttcactgttctgatcagctatggcatcatgtttttatatatttccatagccttgggg
catatcaaaagctgtcgcaggcttctggtggattcgaaaatctccctgggcattgccggg
gtcctgattgtgttgagctcagtggcctgctccttgggcatcttcagctacatcggggtc
cccctgaccctcattgtgatcgaagtcatcccattccttgtgctggctgtgggggtggac
aacatcttcatcctggtccagacctaccagagagatgaacgtcttcaaggggaaaccctg
gaccaacaggtgggccgggtcctgggagaagtggctcccagcatgttcctctcatccttc
gcagagacggtagcgtttttcttaggaggcctgtccgtgatgccggccgtgcacacgttc
tctctcttcgcgggcatggcggtcctcatcgacttcctcctgcagatcacctgcttcgtg
agcctcctgggcttggacattaagcggcaagagaagaaccagctggacgttctctgctgt
gtcaagggggcggcagacgacacaggcgtccaggcctccgagagctgcttgttccgcttc
ttcagaaactcctacgccccgcttctgctcaaggactggatgcggcccctcgtggtagca
gtgtttgtgggtgtgctgtcgttcagcatcgcagtcctgaacaaagtagagatcggattg
gatcagtctctttcaatgccggatgactcctacgtgacggattacttccagtccctgaat
cagtacctgcacgcaggcccacctgtgtacttcgtgctggaagagggccacgactacatg
tccacgaagggtcagaacatggtgtgtgggggcctcggctgcaacaacgactcgctggtg
cagcaggtcttcacggccgcccagctggacagctacacccggataggctttgccccgtcg
tcctggattgatgattactttgactgggtcaagcctcaatcatcttgctgtcgcatctac
aacagcacggagcagttctgcaatgcgtcggtggttgaccctgcctgtgtccgctgccgg
ccactgactccggagggcaagcagagacctcagggcgcagacttcatgaggttcctgccc
atgttcctctccgacaacccgaaccccaagtgtggcaaagggggacatgctgcctacagc
gcggccgtcaacatcctggacaacggcacgagcgtgggagccacatatttcatgacctac
cacacggtgctgcagacctcggctgacttcatcgatgccatggagaaggcccgcctcatc
gccaacaacatcaccaggaccatgaaccagcaagggggtgatcaccgggtgttcccatac
agcgtgttctacgtcttctacgagcagtacctgaccatgattgacgacaccgtcttcaac
ctcggcgtgtccctgggcgccatcttcctggtggccgtgggcctcctgggctgtgagctg
tgggccgcgggcgtcatgtgcgccaccatcgccatgatcctcgtcaacatgttcggcgtc
atgtggctgtggggcatcagcctgaatgcggtttctctggtcaacctggtcatgagctgc
ggcatctccgtggagttctgtagccacatcacgagggcgttcacggtgagcacgaaaggc
agccgcgtggagcgggcagaggaggcgctctcccacatgggcagctctgtattcagtgga
atcacactaacgaaatttggaggcattatcgtgttggcctttgccaaatctcagattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatggacta
atattcctccctgtcttactcagttacataggcccgtcaataaataaagccaaaagtttg
accacgcagcagtgatacagaggtaccgagcgagaacagctcctcagcttccagctgccc
cctcacggacttgagactgtgtctgcgggttggttggtttacccctggacagcaaccgcg
tcgtcaaggctcggttga
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