Budorcas taxicolor (takin): 128069750
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Entry
128069750 CDS
T08909
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04622
RIG-I-like receptor signaling pathway
btax05161
Hepatitis B
btax05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128069750
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
128069750
09172 Infectious disease: viral
05161 Hepatitis B
128069750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btax03019
]
128069750
03041 Spliceosome [BR:
btax03041
]
128069750
03036 Chromosome and associated proteins [BR:
btax03036
]
128069750
Enzymes [BR:
btax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128069750
Messenger RNA biogenesis [BR:
btax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128069750
mRNA cycle factors
Common to processing body (P body) and stress granule
128069750
Spliceosome [BR:
btax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128069750
Chromosome and associated proteins [BR:
btax03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128069750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128069750
NCBI-ProteinID:
XP_052518843
LinkDB
All DBs
Position
X:complement(102656749..102671779)
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDGIGGRGDRGGFGKYE
RGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIES
FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI
RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDRE
EALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARD
YRQSSGGSSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctatgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggttcccgcagtgattcaagagga
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaggtgactatgacggcattggcggccgtggtgacagaggtggttttggcaaatatgaa
cgtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactccca
ccaagtgaacgcttggaacaagaactcttttctggaggcaacactgggattaactttgaa
aaatatgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaaagt
ttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttacact
cgcccaactccagtgcaaaagcatgctattcctattatcaaagagaagagagacttgatg
gcctgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagtcag
atttattctgatggtcccggcgaggctctgagggccatgaaggaaaatggaagatacggg
cgccgcaaacaatacccaatctctttggtgttagcaccaactagagaattggctgtacag
atctatgaggaagccaggaaattttcataccgatctagagttcgtccttgcgtggtttat
ggtggtgctgatattggtcagcaaattcgagacttggaacgtggatgccatttgttagtt
gcgactccaggacgtctagtggatatgatggaaagaggaaaaattggattagacttctgc
aagtacttggtgttagatgaagccgatcggatgttggatatggggtttgaacctcagata
cgtagaatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatgttt
agtgctactttccctaaggaaatacagatgcttgctcgtgacttcttggatgagtatatc
tttttggccgtaggaagagttggctctacctctgagaacataacacagaaagtagtttgg
gttgaagagtcagacaaacggtcatttctgcttgatcttctaaatgcaacaggcaaagat
tcactgaccttagtgtttgtggagaccaaaaagggtgcggattctctggaggatttctta
taccatgaaggatatgcttgtaccagtatccatggagaccgatctcagagagatagagaa
gaggcccttcaccagttccgctcaggaaaaagcccaattctcgtggctacagcagtagca
gcaagaggactggacatatcaaatgtgaaacatgttatcaattttgacttgccaagtgat
attgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggccttgcc
acctcattctttaatgagaggaacataaatattaccaaggatttgttggatcttcttgtt
gaagctaaacaggaagtgccatcttggttagaaaacatggcttatgaacaccactacaag
ggtagcagtcgtggacgatccaaaagtagtagattcagtggaggatttggtgccagagac
tatcgacagagtagtggtggcagcagttccagcttcagcagcagccgcgccagcagcagc
cgcagtggtggaggcggccatggaagcagcagagggtttggtggaggtggctatggaggc
ttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtggggt
aactga
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