Bartonella taylorii: LAJ60_01150
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Entry
LAJ60_01150 CDS
T08323
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btay
Bartonella taylorii
Pathway
btay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAJ60_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btay03019
]
LAJ60_01150
Messenger RNA biogenesis [BR:
btay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAJ60_01150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RMMBL
RNase_J_C
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
USP03088
UniProt:
A0A9Q8YXT6
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Position
277762..279438
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AA seq
558 aa
AA seq
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MVIANENEFVFLPLGGVGEIGMNLAAYGFGPKNLREWLLVDMGVSFAGPELPGADLILPD
IRFLESEKHNISGLVLTHAHEDHYGAVLDLLPKLKVPLYCTSFTAGLLESKRQSDFQSHK
ISLNIFQVGDCFQVGSFSIEAIAVNHSIPESVSLALTTSLGTVIHTGDWKIDHTPSLGPV
TDEKRFRALGNQGVLALLCDSTNACRDGISPSEQQVQRSLSEIISKAEGRVALATFASNI
GRIRSIALAAESVGRQVLVIGRSLKRSIMVAEELGYMKGLAPFITEDDYVHIPRKNIVLV
VTGSQGEPCAALAKLSRNEMGKIMLSAGDTVIYSSRSIPGNEKAILEIQNRFIDLGIKTI
TNEDTLVHVSGHPRRSELLQMYDWIKPKILVPVHGEAMHLTAHAALARQAGIKIVRDIRN
GSILRLAPEPVEVIDQVPVGRIYKDGCLIGNEDELGIRERRKLSYAGYVAVSLHMNSKDE
LLDDIGLITFGLPEKNGKEKSLRDILLDIVENTLYNIPRSKRKNNELIREATRRAVRAAV
NEIWRKKPICTVFLHRSK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggttattgccaacgaaaatgaatttgtttttttacctttaggaggagtaggtgaaata
gggatgaatctggctgcttatggatttggtccaaaaaatcttcgtgaatggttacttgtt
gatatgggggttagttttgctggtcctgaattaccgggagcagatcttattttgcctgat
attcgttttctagaaagtgaaaaacataatatatcgggtcttgttttgacacatgctcat
gaagatcattatggtgctgtccttgatttattaccaaagcttaaagttccgctttactgt
acttcttttacggcgggattattggagagtaaaagacaatcagattttcaatctcataaa
atttcactcaatatttttcaagttggtgattgctttcaggttggttccttttcaattgag
gctatagccgttaatcattcgattccagaatctgtatctttggcacttacaacatcttta
ggcactgtgattcatactggtgattggaaaatagaccatacaccttcgcttggtcctgta
acagatgaaaaacggtttcgtgctttagggaatcaaggtgttttagccttactttgtgat
tccacaaatgcatgccgggatggtatatcaccatcagaacagcaagttcagagaagcctt
tctgaaattatttcgaaagctgaagggcgtgttgctcttgcaacttttgcctctaatatt
ggtcggatacgttcaattgctcttgctgctgaatctgttggtcgccaagttcttgttatt
gggcgctctcttaagcgaagtattatggttgcggaagagcttggttatatgaaaggctta
gcaccatttattacggaagatgattatgtgcatattccgcggaaaaatattgttttggtt
gtgacggggagtcaaggtgaaccgtgtgcggccctagctaaactatcgcgaaatgaaatg
ggaaagattatgctttctgctggtgataccgttatttattcatcacgaagtataccagga
aatgaaaaagctattcttgaaatacaaaatcgtttcatagatctgggaattaaaacgatc
acaaatgaagatacacttgttcatgtttctggtcatcctcgtcgttcagaacttttacag
atgtatgattggataaaaccaaagatacttgttcctgtgcatggtgaggcaatgcatctt
actgctcacgcggctttagcacgtcaagcaggtattaaaattgttagggatattagaaat
ggtagtatactacgtcttgctccagagcctgtagaagtcattgatcaagttcctgttggc
cgcatctataaagatggttgtcttattgggaatgaagatgaattaggaattcgcgaacgt
cgcaaactaagttatgctggttacgttgccgtttccctccatatgaacagcaaagatgag
ttattagatgatattggtttaattacattcggattacctgaaaagaatggaaaagagaaa
agtttgagagatattcttttagatattgtagaaaatacactttataatattcctcgtagt
aaacgaaaaaataatgaacttattcgggaagcaacgcggcgtgcagtgagagcagctgtt
aatgaaatttggcgaaaaaaacctatctgtacagtttttttacatcggtcaaaataa
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