Bartonella taylorii: LAJ60_01190
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Entry
LAJ60_01190 CDS
T08323
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
btay
Bartonella taylorii
Pathway
btay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAJ60_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btay03019
]
LAJ60_01190
03009 Ribosome biogenesis [BR:
btay03009
]
LAJ60_01190
Enzymes [BR:
btay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LAJ60_01190
Messenger RNA biogenesis [BR:
btay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAJ60_01190
Ribosome biogenesis [BR:
btay03009
]
Prokaryotic type
rRNA processing factors
LAJ60_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
USP03096
UniProt:
A0A9Q8YYW1
LinkDB
All DBs
Position
complement(289039..291651)
Genome browser
AA seq
870 aa
AA seq
DB search
MSNKMLIDASHPEETRVVVVHGNKIEELDFESEHKKQLKGNIYLARITRVEPSLQAAFVE
YGGNRHGFLTFSEIHPDYYQIPIADRLALLEEEEKAAVGENYVDSFTEETNKNKKRSRKT
KKDERSNIMAADIENDMTSEAITVDDVEETFDANISHDDIEMVGAEDVREELPTYQRKQG
RQYKIQEVIKRRQILLVQVIKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITN
VQDRKRLKEIVKELAVPKGMGVILRTAGANRTKAEIKRDYEYLTRLWDTVRNLTLKSTAP
CLVHEESNLIKRSIRDLYDKNINEILVSGDQGYREAKDFMRMLMPSHAKVVQPYRDPIPI
FARNNIEIQLDKMLHPQVSLKSGGYLVINQTEALVAIDVNSGRSTKELSVEKTALQTNLE
AAEEIARQLRLRDLAGLIVIDFIDMLEERNVKLVEKKLKDCLKSDRARIQVGHISHFGLL
EMSRQRIRISVLESTTQPCPHCAGTGSVRSESSIALHVMRSIEEYLLHNPQHNITVRTPV
TTALYVLNYKRNILVNLEARFKLNISIEADDSIGTQHFIISKGTIAEAVSQPLLVFEDDN
KEDDAILIDSKSIEDKIPVEKNQKRQRKDRQGENDNSLSTAHKKDNMLNDESRRRFRRRG
RRGGRRNQDNSFYQARIPYAEPVGDFAKQSLEEIKTEHRKRRIPAAESVQFEEVKNDIQH
LVVQQSEAVKVDTDTKPKKRKARSSKTTQKQISPENDQSIEIPEPLEEKFTASSVRKVKT
KKVSEPAREKVEKAPADGKKSTRKKSLSKELTPINETSEKKTVSKESIEPILSKIEEKVN
HPVVISSTPDDAQKTKRIGWWKRKTLSKSQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaatgcttatagatgcctcccatccagaggaaacacgtgttgttgttgtt
cacggcaacaaaattgaagaacttgattttgaatcagaacataaaaaacagctcaagggg
aatatttatctagcacgtattacgcgtgtagagccatcactccaagcagcttttgtcgaa
tatggtggcaaccgccacgggtttttgacattttctgaaattcatcccgattattatcaa
attcctattgctgatcgtctcgctcttcttgaagaagaagaaaaagccgctgtaggagaa
aattatgtagatagttttactgaagaaaccaacaaaaataaaaaacgctccagaaaaaca
aaaaaagatgagcgtagcaatatcatggcagcggatattgaaaatgacatgacatccgag
gcaataacggttgatgatgtagaagaaacatttgatgcaaatatttctcatgatgatatc
gaaatggtaggtgccgaggatgtccgtgaagaactccccacctatcagcgaaaacaagga
cgtcagtataaaattcaagaagtaattaaacgacgtcaaattttgttggtgcaagttatc
aaggaagagcggggcaataaaggtgctgcactcacaacatatttatccctagcaggtcgt
tattctgttttaatgcccaacacagcacgtggtggtggtatttcacgaaaaatcacgaat
gtacaagatcgcaaacgtcttaaagaaattgtaaaagaattagcagttcccaagggtatg
ggagttatcttaagaaccgctggcgccaatagaacaaaagctgaaattaaacgcgattat
gaatatctcacgcgtctatgggatactgttcgcaatttaacactcaaatccacagcacca
tgtcttgttcatgaagaaagcaatctcataaagcgctctataagagatctttatgataag
aatatcaatgaaattcttgtttctggtgatcaaggatatcgtgaagcaaaagacttcatg
cgtatgctcatgccaagtcatgcaaaagtcgtacagccttatcgcgatcctattcctatt
tttgcacgcaataatattgaaattcaacttgataaaatgttgcacccgcaagtttcttta
aaatctggtggttatcttgttattaatcaaacagaagcgcttgttgctattgatgtaaac
tctggacgctcgactaaagaactttctgtcgaaaaaacagcattacaaaccaatcttgaa
gccgcagaagaaatagcgcgtcagttacgattgcgtgatcttgctggtttgattgtgatt
gatttcattgacatgcttgaagagcgtaatgtgaaactggttgaaaaaaaattgaaagat
tgtttaaaaagtgatcgtgcacgtattcaagttggtcatatttcacactttggccttttg
gaaatgagtcgtcaacgtattcgcatatcggttttagaaagtacgacacaaccctgtccg
cattgcgctggaacaggaagcgtacgttctgaatcatcaattgctttacatgtcatgcgt
tcaattgaagagtatcttcttcataatccgcaacacaacattactgtacgcacacccgta
acaacagcgctttatgtgttaaactataaacgcaatattcttgttaatctagaagcgcgc
tttaaacttaatattagtattgaagcagatgatagcattggaacacaacatttcattatt
tctaagggtacaatagcagaggcggtttctcagcctctattggtctttgaagatgacaat
aaagaagatgatgcaattttgatagatagtaaatctatcgaagataaaatccccgttgag
aaaaaccagaaacggcagcgtaaggatcgtcaaggtgagaatgataattctctctctacc
gctcataaaaaagacaatatgttaaatgatgagtctcgtcgtcgcttccgtcgtcgggga
cgtcgtggtggtcgccgtaatcaagataatagcttttatcaagctcgtattccttacgca
gaaccagtgggagattttgctaagcagtccttggaagaaattaaaacagagcatcgtaag
cgccgtattccagctgctgaatctgttcaatttgaagaagtaaaaaatgatatacaacat
ctagttgtacaacaaagtgaagctgtaaaagttgatacggatacaaaacctaaaaaacgc
aaagcacgttcttcaaaaactacgcaaaaacagatctctcctgagaacgatcaaagtata
gagataccagaacctcttgaagaaaaatttacagctagctcggtccgtaaagttaaaaca
aaaaaagtgtctgaacctgctcgtgagaaggtagaaaaagctcctgcagatggtaaaaaa
tcaacacgtaaaaaatcactctctaaagaattaactccaataaatgaaacatcagagaaa
aaaactgtaagtaaggaatctattgagccaattctctctaaaattgaggagaaagttaat
catcccgttgttatatcatcaacacctgatgatgctcaaaaaactaagcgtattggttgg
tggaaacgcaaaactctttccaaaagtcaataa
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