Bacillus thuringiensis BMB171: BMB171_C3473
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Entry
BMB171_C3473 CDS
T01239
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btb
Bacillus thuringiensis BMB171
Pathway
btb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMB171_C3473 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btb03019
]
BMB171_C3473 (pnp)
03016 Transfer RNA biogenesis [BR:
btb03016
]
BMB171_C3473 (pnp)
Enzymes [BR:
btb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BMB171_C3473 (pnp)
Messenger RNA biogenesis [BR:
btb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMB171_C3473 (pnp)
Transfer RNA biogenesis [BR:
btb03016
]
Prokaryotic type
tRNA degradation factors
BMB171_C3473 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
KorB
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADH08283
LinkDB
All DBs
Position
complement(3703431..3705569)
Genome browser
AA seq
712 aa
AA seq
DB search
MSQEKQVFSIDLAGRQLTVETGQLAKQANGAVLVRYGDTAVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCSSEMAAMLGSSLALSISDIPFEGPIAGATVGRINGEFVINPTVEQQEQSDIHLVVA
GTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKEKSEVKLYEVDA
DLNQAVREMAEEDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEADADTLGQVNEILYK
IVKEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKTGEHYTILS
DIQGMEDHLGDMDFKVAGTAQGVTALQMDIKIDGLSREILEEALQQAKVGRVHILNHMLS
VIPEPRTELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
INQEMNDKAKKIIEDIVREVQVGEIYEGKVKRVEKFGAFVELFSGKDGLVHISELALERV
GKVEDVVKIGDVITVKVIEIDKQGRVNLSRKVLLKEEQEKEAAKEENKQEQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaaagcaagtcttctcgatagatttagctggtcgccagctaacagttgaa
actggtcagcttgcaaaacaagcgaacggagcagtattagtaagatatggcgatacagcg
gttctatctacagcaactgcatcaaaagaagcaaaaaatgtagatttcttcccacttaca
gtaaactatgaagagcgtttatatgcagtcggaaaaattcctggcggttttattaagcgt
gaaggtcgtccaagtgaaaaagcaattttggcaagtcgtttaatcgaccgtccaattcgt
ccgctattcgcagatggcttccgtaacgaagtacaagttgtcagcattgtaatgagtgtt
gatcaagattgttcttctgaaatggcagctatgcttggttcttcattagcgttatcgatt
tcagatattccatttgaaggtccaatcgctggtgcgacagttggccgtattaatggcgaa
ttcgttattaacccaacagtagaacagcaagaacaaagtgatattcacttagttgtagct
ggtacgaaagatgcgattaacatggttgaagcaggagcagatcaagtacctgaagaaaca
atgttagaagcaattatgtttggtcatgacgaaattaaacgtctaattgcattccaagaa
gagattgtacaagctgtaggtaaagagaaatcagaagtgaaactttatgaagttgacgct
gatcttaaccaagctgtacgtgaaatggctgaagaagatatgcattcagcaattcaagta
catgagaaacatgcacgtgaagatgcaattaacgaagtgaaaaagcgtgttattgagcat
tacgaagcgcaggaagctgacgctgatacattaggacaagtaaatgagattttatataaa
attgtaaaagaagaagtacgtcgtcttattacagttgaaaaaatccgtccagatggccgt
aaaggtgacgaaatccgtccattagcatcagaggttggtattttatctcgtacacacggt
tctggtttgttcactcgtggacaaacacaagcattaagtatttgtacattaggtgcatta
ggcgatgtgcaaattttagatggtcttggtgtagaagaatcaaaacgctttatgcaccat
tacaatttcccatcatttagtgttggtgaaacaagaccaatgcgtggaccaggtcgtcgt
gaaatcggtcacggtgcactaggagaacgcgcacttgagcctgtaattccatctgaaaaa
gatttcccatacacagtacgtcttgtatctgaagttttagaatcaaatggttctacttca
caagcaagtatttgtggtagtactttagcaatgatggatgctggtgttccacttaaagct
ccagttgcaggtattgcaatgggtctagttaaaactggtgagcattacacaattttatct
gatattcaaggtatggaagatcatttaggtgatatggactttaaagtagcaggtacagca
caaggtgtaactgcactacaaatggacattaaaatcgatggtctatctcgtgaaatttta
gaagaggcattacaacaagcgaaagttggtcgtgtgcacattctaaatcatatgttatct
gttattccagagccacgcactgaattatcagcgtacgctccaaagattattacaatgaca
attaatccagataaaatccgtgacgttatcggaccgagcggtaaacaaatcaataaaatt
attgaagaaactggcgttaaaattgacatcgagcaagatggcacagtattcatttcttca
ataaaccaagaaatgaacgacaaagctaagaaaattatcgaagatatcgttcgcgaagta
caagtaggtgaaatctacgaaggaaaagtgaaacgtgttgagaaattcggtgctttcgtt
gaattattcagcggtaaagatggattagttcatatttctgaacttgcacttgagcgtgta
ggtaaagtagaagacgttgtaaaaatcggtgatgtaattacagttaaagttatcgagatt
gacaagcaaggtcgcgtaaatctatctagaaaagtattgctaaaagaagagcaagaaaaa
gaagctgctaaagaagaaaacaaacaagagcagcaataa
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