Bacillus thuringiensis BMB171: BMB171_C3498
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Entry
BMB171_C3498 CDS
T01239
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
btb
Bacillus thuringiensis BMB171
Brite
KEGG Orthology (KO) [BR:
btb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btb03032
]
BMB171_C3498 (topA)
03400 DNA repair and recombination proteins [BR:
btb03400
]
BMB171_C3498 (topA)
Enzymes [BR:
btb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMB171_C3498 (topA)
DNA replication proteins [BR:
btb03032
]
Prokaryotic type
DNA Topoisomerases
BMB171_C3498 (topA)
DNA repair and recombination proteins [BR:
btb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMB171_C3498 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
SAND
Toprim_3
DUF7078
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ADH08308
LinkDB
All DBs
Position
complement(3732277..3734232)
Genome browser
AA seq
651 aa
AA seq
DB search
MGIEVKNNFTPKYITIRGKGPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVD
VESDCRVVFNEITKDAIKESFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKG
LSAGRVQSVAVRLIIEREREIQNFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNE
TQVNEIIEQMKDNAFSVENVTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQL
YEGIDLGKQGTVGLITYMRTDSTRISETAQTEARTYITEAYGTEYIGTEKKKETKKSNAQ
DAHEAIRPTSVMRKPEELKSFLGRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQ
FRASGSVVKFPGFMKVYVESKDDGAEEKDKMLPPLEVGETVFSKDLEPKQHFTQPPPRYT
EARLVRTLEELGIGRPSTYVPTLETIQKRGYVGLDNKRFVPTELGEIVIELILEFFPEII
NIEFTANMEQSLDEVEEGNANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCEL
CNHPMVFKMGKYGKFMACSNFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYG
CGTYPECDFVSWDKPIGRKCPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggggatagaagtaaagaacaacttcaccccgaagtatattaccattcgtggtaaaggt
cccgtcttaaaagatttaaaatcagcggcgaaaaaagcaaagaaagtctatctcgcggcc
gatccagaccgtgaaggggaagcgattgcttggcatttagcgaatacgttaaatgtggac
gttgaatcagattgtcgggttgtgtttaatgagattacgaaagatgcaatcaaagaatca
tttaaacatcctcgtgcaattaatatggatttagtggatgcacaacaagcaagacgtata
cttgatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaagga
ttaagtgcagggcgtgtacaatctgtagcagttcgtttaatcatcgagcgtgaaagggaa
attcaaaactttgaacctgaagaattctggacaattaaaacagaatttgtaaaaggaaaa
gacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacaaatgaa
acgcaagtgaatgaaataattgaacagatgaaagacaatgcgttttcagttgaaaatgta
acgcgcaaagagcgaaaacgtaatcctgcattaccgtttacaacatcttccttgcaacaa
gaagcagcacgtaagttaaacatgcgagcaaagaaaacaatgatgcttgcacagcaattg
tatgaagggatagatcttggaaaacaaggaactgtaggtcttattacgtatatgagaact
gattcaacacgtatctcagaaacagctcaaacagaggctcgtacttacatcactgaagcg
tatggtacggaatacataggaacagaaaagaagaaagaaacgaaaaagtcaaatgcacaa
gatgcgcatgaggcaattcgtcctacttcagtaatgagaaagccagaggaactaaaaagt
ttcttaggtcgtgatcaacttcgattatataaattgatttgggagcgatttgttgcaagt
caaatggcgtctgctataatggatactgtgacagcgagactcattaataacaatgttcag
ttccgtgcaagtggatcggttgtaaagttcccaggatttatgaaagtgtatgtagagtca
aaagatgatggtgctgaagaaaaggataagatgttgccacctttagaagtaggggaaact
gtattttcaaaggatttagaaccaaagcaacattttacacaacctcctccgcgctataca
gaggctcgcctagtaagaacacttgaagaacttggaattggaagaccgtcaacatatgta
cctacacttgaaacaattcaaaagcgtgggtatgtaggtttggataataaacgcttcgtt
ccgactgaacttggtgaaatagtaattgaacttattttagagtttttcccagaaattatt
aacattgaatttactgccaatatggagcaaagccttgatgaagtagaagaaggaaatgcg
aattgggtaaaaattgttgatgatttctacgtaggttttgaaccgcgtttagaaaaagcg
gaaaaagaaatgcgtgaagtggaaattaaagatgaaccagctggggaagattgtgaatta
tgtaatcacccaatggtctttaaaatgggtaaatacgggaaatttatggcttgctcgaat
ttcccagattgtcgtaatacaaagccgattgtgaaagaaatcggtgttacttgtccaaag
tgtgataagggtcaaattattgaacgccgtagtaataaaaagaaacgtcttttctatggg
tgcggtacgtatccggaatgcgactttgtatcttgggataagccaattggtcgtaagtgt
ccgaagtgcgaaggcatgcttgtagagaaaaagttgaaaaaaggcgtgcaagtacaatgt
atttcgtgcgattatgaagaagaacaacaaatgtga
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