Bacillus thuringiensis BMB171: BMB171_C3987
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Entry
BMB171_C3987 CDS
T01239
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
btb
Bacillus thuringiensis BMB171
Pathway
btb03030
DNA replication
btb03430
Mismatch repair
btb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMB171_C3987 (holA)
03430 Mismatch repair
BMB171_C3987 (holA)
03440 Homologous recombination
BMB171_C3987 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btb03032
]
BMB171_C3987 (holA)
03400 DNA repair and recombination proteins [BR:
btb03400
]
BMB171_C3987 (holA)
Enzymes [BR:
btb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMB171_C3987 (holA)
DNA replication proteins [BR:
btb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMB171_C3987 (holA)
DNA repair and recombination proteins [BR:
btb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMB171_C3987 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ADH08796
LinkDB
All DBs
Position
complement(4197186..4198196)
Genome browser
AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYLLYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVVEANAMQIQDVQKWIVARADEVHVHIDNAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEITTKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLYQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIIELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaaaattaaaaagaaacagtttgctccgttatatttactatat
ggaacggaagctttttttataaatgaaacgataaagcttattacgacagaagcacttgaa
gaagaagatcgagagtttaatgttgtgacatacgatttagaagaagcgtatttagaagat
gtggttgaggatgcgcgtacgcttcctttcttcggagaacggaaagtactgttaataaaa
tcaccgctatttttgacttcgcaaaaagaaaagttagagcaaaatataaaaattttagaa
gaatacattggtgaaccttctccattttctattcttgtttttgttgcgccttacgaaaaa
cttgatgagcgaaaaaaaattacaaaactattaaagaaaacagcagatgtagtagaagca
aatgcgatgcaaatacaggatgttcagaagtggattgttgctcgtgcagatgaagtgcat
gtgcatattgataacgcggctgttagtttgttgctagagcttgtgggaagtaatgtaaca
atgttggcgaaggaaatggacaagttaacgttatacgtcggtatgggcggagagattacg
acgaaacttgttgcagagcttgtaccaaaatccgttgagcaaaatgtattcgctttgaca
gaaaaagtggtgaaaaaagatattgcaggtgcaatgcaaattttggatggattatttacg
cagcaggaagagccgattaaattgcttgcgttattagtgagtcaattccgcttgttgtat
caagtgaaagagctacagcaacgtggttatggacaaaatcaaattgcgtctcatattggt
gtacatccgtatcgcgtgaagttggcaatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtgattatagaattagcggaagctgattatagtatgaagacgggaaagatg
gataagaaacttgtgctcgagtttttcttaatgcgattaaatcatatgtga
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