Bacillus thuringiensis BMB171: BMB171_C4230
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Entry
BMB171_C4230 CDS
T01239
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
btb
Bacillus thuringiensis BMB171
Pathway
btb03030
DNA replication
btb03410
Base excision repair
btb03420
Nucleotide excision repair
btb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMB171_C4230 (polA)
03410 Base excision repair
BMB171_C4230 (polA)
03420 Nucleotide excision repair
BMB171_C4230 (polA)
03440 Homologous recombination
BMB171_C4230 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btb03032
]
BMB171_C4230 (polA)
03400 DNA repair and recombination proteins [BR:
btb03400
]
BMB171_C4230 (polA)
Enzymes [BR:
btb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMB171_C4230 (polA)
DNA replication proteins [BR:
btb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BMB171_C4230 (polA)
DNA repair and recombination proteins [BR:
btb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BMB171_C4230 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMB171_C4230 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DNA_pol_P_Exo
WHD_BrxR
HHH
Motif
Other DBs
NCBI-ProteinID:
ADH09039
LinkDB
All DBs
Position
complement(4441095..4443728)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTYSEYKGGRQKTPPELSEQFPFIREMLDAFNVPRYELENYEADDIMGTLAKE
ASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEYTKEALFEKYSLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEEVYENLDQVSGKKLKEKLEENKEQALMS
KDLATIITDAPITVHVDDMAYKGYEASDVIPMFESLGFTSLLNKLGVTPEETAPAELDDI
TFDIVEEVTEEMLQQDSALIVEVQEDNYHKADIQGFGIQNENGCYFIQTDIALKSDAFKE
WLADGEMRKHTFDAKRAIVALKWNGIDMQGIDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPELKVVAEHVARKVHVLYDVKQTFVEELKKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELAGRLKEMEQEIYKLAGTEFNINSPKQLGVILF
ENLNLPVIKKTKTGYSTSADVLDKLMNHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDS
SKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWIMYAADYSQIEL
RVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSR
NFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKE
EIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtcgtattagtagatggtaataatatcgcgtatcgtgctttctttgca
ctaccgcttttaaataacgacaaaggtatacatacgaacgcaatttacggttttacaatg
atgttaatgagaatattagaggaagaaaagccaactcatatgttagtggcgtttgatgca
ggcaaaacaacgttccgtcataaaacgtatagtgagtataaaggaggacgtcaaaagact
ccacctgaattatcagagcagttcccgtttattcgtgagatgctggatgcgttcaatgta
ccgcgttatgaattagaaaattatgaagcggatgacatcatgggaacgttagcgaaagaa
gcgagtgagcaaggggcgagtgtaaaagttatttcaggagataaagatttacttcaactt
gtttctgataacacgcttgtatgtattccgcgaaaagggattacagaagtggatgaatat
acgaaagaagctttatttgaaaaatacagcttatcaccaaagcaaattatcgatatgaaa
ggtttaatgggagaccaatcagataatattccgggtgtaccaggagttggtgaaaaaacg
gcgattaaattgttaacacagtttggaacggttgaagaagtgtatgaaaatctagatcaa
gtaagtgggaagaaattaaaagaaaaactggaagaaaataaagaacaagctcttatgagt
aaggatcttgcaactattattacagatgcgccgattacagttcatgtggatgatatggcg
tataaaggatatgaagcaagtgatgtcattccaatgttcgagagtttaggatttacatct
cttttaaataaattaggcgttacgccagaagaaacagctccagctgaattagatgatatt
acatttgatattgtggaagaagttacagaagaaatgcttcagcaagatagtgcgcttatc
gttgaagtacaagaagataactatcataaagcagacattcaaggtttcggtattcaaaat
gaaaatggatgttactttattcagacagacattgctcttaagtcagatgcttttaaagag
tggcttgcagatggagagatgagaaagcatacatttgatgcaaagcgtgcaatcgttgca
ctgaaatggaatgggatagatatgcaagggattgactttgatctattaatcgctgcttat
ttacttgacccggctgatacagataaagatttccgtactgtagcgaaaatgaaagaaacg
catgctgtgaaatcagatgaagaagtttacggaaaaggtgcgaaacgtgctgttccagag
ttaaaggtagtcgcggagcatgtggctcgtaaagtgcatgtattatatgatgtaaagcaa
acattcgttgaagagttaaagaagaatgagcaatatgaactgtttacagagttagaattg
ccgcttgcacgtgtattagctgatatggaagtaaagggtgtaaaagttgatacagagcgt
cttcgtaatatgggagaagaacttgcgggtagattaaaggaaatggaacaggaaatctat
aagcttgcgggaacagagtttaatattaattcaccgaagcagcttggtgttattctgttt
gagaacttaaacttaccggttattaaaaagacgaaaacaggttattctacgtcagctgat
gtactagataagcttatgaatcaccatgaaattattccaaatattttacattatcgtcaa
ttagggaaactaaattcaacttacattgaaggtttactgaaagttgtacatgaagattca
tctaaaattcatactcgctttaatcaagtgttaacgcaaacaggtcgattaagttcaacg
gatccgaacttgcaaaatatcccgattcgattagaagaaggaagaaagattcgtcaggca
tttgttccatcagaagaaggatggattatgtatgcggctgattattcacaaatcgaactg
cgtgtattagctcatattgcaaatgataaagggctagttgaagcgttccaacatgacatg
gatattcatacgaaaacagctatggatgtatttggcgttgaaaaagatgaagtaacttca
aatatgagacgacaagcgaaagctgttaacttcggaattgtgtatggtattagtgattat
ggtctttcacaaaacttaggaattacaagaaaagcagcagcggaatttattgaaaagtat
ttagaaagtttccctggtgtacaagaatacatggaggacatcgtaaaagatgcgaaacaa
aaaggatatgtggctacattattaaatcgtcgccgttatattccagaaattacgagtcgt
aattttaacttgcgtagcttcgctgagcgtacagcgatgaatacaccaattcaaggtact
gcagcagatattattaaaaaagcgatgattattatggcagatcgtttagaagaagaagga
ttacaagcgcgtcttcttctgcaagtacacgatgaattaatatttgaagcaccaaaagaa
gaaatcgaaaaattagagcagcttgtacctgaagtaatggaacatgcgattgaacttgca
gttccgctgaaagttgattattcttacggtccaacttggtacgacgcaaaataa
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