Bacillus thuringiensis serovar chinensis CT-43: CT43_CH0221
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Entry
CT43_CH0221 CDS
T01838
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT43_CH0221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btc03019
]
CT43_CH0221
03009 Ribosome biogenesis [BR:
btc03009
]
CT43_CH0221
Enzymes [BR:
btc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CT43_CH0221
Messenger RNA biogenesis [BR:
btc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CT43_CH0221
Ribosome biogenesis [BR:
btc03009
]
Prokaryotic type
rRNA helicases
CT43_CH0221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEA13914
LinkDB
All DBs
Position
236261..237850
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AA seq
529 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIQNENLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRGGGDGRNRDGRN
RDGNRDRNRDGNRDRNRDGGSRGRRGEGQGRPGSSNGRGERKHHSRPQA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgagtctttactgcaatcggttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacaaataaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
attctaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagactgttgttcttgatgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcgatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgacttaacacaggcgaaacgtatg
tctgtattacgtaaatttaaagaaggtgctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgcaggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgcacaacaaag
cgtaaagttgatcgtatggaagcaccgacacttgatgaggcattagaaggtcaacaacgt
ttaatcgccgaaaaacttcaaagcacaatccaaaatgagaacttatcatactacaagcgt
attgcagaagaaatgttagaagagaatgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccgatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgtggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgacggacgtggcggtggcgatggtcgtaaccgtgatggacgtaat
cgtgacggaaaccgtgatcgcaatcgtgatggaaaccgtgatcgtaatcgtgatggtggt
agtcgtggtcgtagaggtgaaggtcaaggtcgcccaggatcttcaaatggacgcggcgaa
agaaaacatcatagccgtccacaagcttaa
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