Bacillus thuringiensis serovar chinensis CT-43: CT43_CH2811
Help
Entry
CT43_CH2811 CDS
T01838
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT43_CH2811 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btc03019
]
CT43_CH2811 (recQ2)
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH2811 (recQ2)
Enzymes [BR:
btc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CT43_CH2811 (recQ2)
Messenger RNA biogenesis [BR:
btc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CT43_CH2811 (recQ2)
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CT43_CH2811 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
A-ATP_synth_H_N
HTH_45
GerE
HEM4
HTH_10
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AEA16485
LinkDB
All DBs
Position
complement(2834767..2836884)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISIAEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VREDICNTLEINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDNRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSEFIEFLISDELIAVEHG
TYPTLKVTEKGKEVLLGKENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCVKMPQSDSELLTVKGIGEHKLVKYGSHFLQAVQHFIEENPNYAETIKTEV
VSERKKSGKASANSHLETYEMYKQGIDLNEIAKERNLSRQTIENHLIRCYEDGMEVEWQS
FVPSEYESLIETAVQNAEGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactaaagcacaagaacttttagcgtcctactttggttattcttcgtttcgaaga
ggacaagatgaaacaattaaaaatgtactagatgggaaagatacagtttgtattatgcca
acaggtggcggtaagtcgatttgttatcaaattccggcattagtatttgaaggaacgacg
ttggttatatcccctttaatatcacttatgaaggatcaagtagatacattggtacagaat
ggcatttcagctacatatattaatagttctatttctattgctgaagcaaatcagcgaatt
caattagcgaaacaaggacattacaagttactttatgtggcgcctgagcgtcttgattcg
atggagtttgttgaccaacttatcgatatgaaaatccctatgattgcgattgatgaagca
cactgtatttcacagtggggacatgatttccgtccaagttatttacatatacatcgcatt
ttagattatcttccagaaaaaccgctcgtattagcattaacagcaacagcaacaccgcaa
gtacgtgaagatatttgtaacacacttgaaattaatcaagaaaatacaattatgacaacg
tttgagcgagagaacttatcgttttctgtcattaaaggacaagatcgaaatgcatatttg
gcggattatattcgtcaaaatcaaaaggaatctgggattatatatgcagctactagaaaa
gtagtcgatcagttatatgaagatttaatgaaggcaggagtttctgtatcaaaatatcat
gctggtatgagtgatagtgatcgaaatgagcaacaagaactctttttacgagatgaagta
agtgtaatggtagcaacatctgcattcgggatgggtattgataaatcgaatattcgttac
gtaattcattatcagcttccaaaaaatatggaaagttactatcaagaagcgggacgtgct
ggtcgtgatggattagatagtacatgtatattgttatattcttctcaagatgtacaagta
cagcggtttttaattgatcaatcaactggagaatcacgtttttcaaatgaacttgaaaaa
ttgcaaaatatgaccgattactgtcatactgaacaatgtttacaatcattcattttgcaa
tactttggagaagaaccgaaagaagattgtggacgctgtggtaattgtacagacaatcgc
gagagcatcgatgtgacaagggaatcacaaatggttttatcatgcatgattagaacgaac
caacgctttggaaagcaaatgatagcgcaagtattaacggggtcgaaaaataagaaagtt
attgaatttaatttccatactttaccaacgtatgggcttttatcgaaccgtagtgtaaaa
gaggtcagtgagtttattgagtttttaatttcagatgagttaattgcagttgaacatggc
acttatccgacgttaaaagtaacagaaaaagggaaagaagtattacttggtaaagagaat
gttttacgaaaagaacgagtagagacaagacaaattgttcaagaccatcctttatttgaa
gtgcttcgtgaagtacgtaaagaaattgcacaaggagaaggtgtacctccgttcgttatt
ttctctgaccaaacattgaaagatatgtgcgtgaaaatgccgcaaagtgattccgaattg
ttgacggtaaaaggtatcggagaacacaaacttgtgaaatatggctcgcacttcttacaa
gcagttcagcattttattgaagaaaatccaaattatgctgaaacgattaagacagaagta
gtttcagagcgtaaaaagtcaggaaaagcgtccgcaaattctcatttagaaacgtatgaa
atgtataaacaaggtattgatttgaatgagattgcaaaagaacgcaacttatcaagacaa
acaatcgaaaaccatttaattcgctgctacgaggatggaatggaagtagagtggcaaagt
tttgttccatcagagtatgaatctcttattgaaactgccgttcaaaatgcagagggtggt
ctgaaatctattaaagaacagcttccgaatgaagtgagttactttatgattcgtgcttat
ttacaaataagaaagtag
DBGET
integrated database retrieval system
