Bacillus thuringiensis serovar chinensis CT-43: CT43_CH3833
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Entry
CT43_CH3833 CDS
T01838
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btc03032
]
CT43_CH3833 (topA)
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH3833 (topA)
Enzymes [BR:
btc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CT43_CH3833 (topA)
DNA replication proteins [BR:
btc03032
]
Prokaryotic type
DNA Topoisomerases
CT43_CH3833 (topA)
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CT43_CH3833 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
zf_Rg
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AEA17498
LinkDB
All DBs
Position
complement(3848412..3850490)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIEREK
EIQSFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNETQVNEIIEQMKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARTYITEAYGTEYIGTEKKKESKKSNAQDAHEAIRPTSVMRKPEELK
SFLSRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQFRASGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPPLEVGETVFSKDLEPKQHFTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVGLDNKRFVPTELGEIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCGHPMVFKMGKYGKFMACS
NFPDCRNTKAIVKEIGVTCPKCEEGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgagaaatat
ttagggaaaaaatacaaagttgtcgcgtctatgggacatgttcgcgatttgccaaaaagt
caaatggggatagaagtaaagaacaacttcaccccgaagtatattaccattcgtggtaaa
ggtcccgtcttaaaggatttaaaatcagcggcgaaaaaagcaaagaaagtttatctcgcg
gccgatccagaccgcgaaggggaagcgattgcttggcatttagcgaatacgttaaatgtg
gacgttgaatcagattgtcgggttgtgtttaatgagattacgaaagatgcaatcaaagaa
tcatttaaacatcctcgcgcaattaatatggatttagtagatgcacaacaagcaagacgc
atacttgatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaa
ggattaagtgcagggcgtgtacaatctgtagcagttcgtttaatcatcgaacgtgaaaag
gaaattcaaagctttgaacctgaagaattctggacaattaaaacagaatttgtaaaagga
aaagacacatttgaagcaagtttttacggtgtagatggtgaaaaagttcaattaacgaat
gaaacgcaagtgaatgaaataattgaacagatgaaagacaatgcgttttcagttgaaaat
gtaacgcgcaaagagcgaaaacgtaatcctgcattaccgtttacaacatcttccttgcaa
caagaagcggcacgtaagttaaatatgcgagcaaagaaaacgatgatgcttgcacagcaa
ttgtatgaagggatagatcttggaaaacaaggaactgtaggtcttattacgtatatgaga
actgattcaacacgtatctcagaaacagctcaaacagaggcacgtacttacatcactgaa
gcgtatggtacggaatacataggaacagaaaagaagaaagaatcgaaaaagtcaaatgca
caagatgcacatgaggcaattcgtcctacttcggtaatgagaaagccagaggaactgaaa
agtttcttaagtcgtgatcaacttcgattatataaattgatttgggagcgatttgttgca
agtcaaatggcgtctgctataatggatactgtgacagcgagactcattaataacaatgtt
cagttccgtgcaagtggatcggttgtaaagttcccaggatttatgaaagtgtatgtagag
tcgaaagatgatggtgcggaagaaaaggataagatgttgccgcctttagaagtaggggaa
actgtattttcaaaggatttagaaccgaagcaacattttacacaacctcctccgcgctat
acagaggcccgtctagtaagaacacttgaagaacttggaattggaagaccgtcgacttat
gtacctacacttgaaacgattcaaaaacgtggatatgtaggtttggataataaacgcttc
gttccgactgaacttggtgaaatagtaattgaacttattttagagtttttcccagaaatt
attaacattgaatttactgccaatatggagcaaagccttgatgaagtagaagaaggaaat
gccaattgggtgaaaattgttgatgatttctacgtaggatttgaaccgcgcttagaaaaa
gcggaaaaagaaatgcgtgaagtggaaattaaagatgagccagctggggaagactgtgaa
ttatgcggacatccaatggtctttaaaatgggtaaatacgggaagtttatggcttgttcg
aatttccctgattgtcgtaatacaaaagcgattgtgaaagaaatcggtgtaacttgtccg
aaatgtgaagaaggacaaattattgagcgtcgcagtaacaaaaagaaacgtcttttctat
ggatgcggtacgtatccagagtgtgactttgtatcttgggataagccaattggtcgtaaa
tgtccgaagtgtgaaggcatgcttgtagagaaaaagttaaaaaaaggcgtgcaagtacaa
tgtatttcgtgcgattatgaagaagaacaacaaatgtga
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