Bacillus thuringiensis serovar chinensis CT-43: CT43_CH4425
Help
Entry
CT43_CH4425 CDS
T01838
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03410
Base excision repair
btc03430
Mismatch repair
btc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT43_CH4425 (recJ)
03430 Mismatch repair
CT43_CH4425 (recJ)
03440 Homologous recombination
CT43_CH4425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH4425 (recJ)
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CT43_CH4425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CT43_CH4425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CT43_CH4425 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AEA18086
LinkDB
All DBs
Position
complement(4391526..4393865)
Genome browser
AA seq
779 aa
AA seq
DB search
MLQPKTRWKEKEYNDERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP
FLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGAEVEFYIPNRFT
EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEANVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL
SDDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEENKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLCIDPIKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNEQADAILTEEDFIPITAVDVFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV
IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNAEANLAELPKEKITMVYFSEEVL
NKFSLESYKEKLMHASEVTHLDDQYIVLLDLPKGTDELSELFKVGFPARIYTLFYQENNH
LFSTVPTREHFKWYYSFLSQKTPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatgacgaacgagtgagtgaa
ttagcaagtaaattacagttatcgccacttgtcgtttcattattcctcggtagaggacta
gatacagaagataagattttagattttttaaatacagaaaatcaagaatttcatgatcca
tttttattagaaggaatggatagaacggtagaacgtgtaaataaggcgattcaaaatgga
gaacaaatattaatatttggtgattacgatgcagacggagtaagtagtacaactgtgtta
tatcttgctcttcaagaattaggtgcagaagtagaattttatattccaaatcgttttaca
gaagggtatgggccgaacgaagaagcgtttcgttgggcgcatagcgcagggttctcactg
attattactgtcgacactggcatcgcagcagtacatgaagcgaatgtagcgaaagagctt
ggaatagatctaattattacagatcaccatgagccaccgccagaattgccagaagcactt
gcgattatacatccgaaattagatggcggtgtatatccgtttcactatttagctggtgta
ggtgttgcgtttaaagttgcgcatgcactattaggccgtgtaccagaacatttattagag
attgcagtaatcggtacagtagctgatttagtgtcacttcatggtgaaaataggttgcta
gtgaaacgcggtttaaaacatatgcgtatgacgaaaaatattggtttaaaggcattgttt
aaagttgctaacgtttcgcaaagtgaaattacagaagagagtattggcttctcaattgca
ccgcgtattaatgcggtcgggcgtttagaagatgcaacgccggctgtacaccttttatta
tcagatgatcctgaggaagcgaaagagttggccgaagaaattgatgagctgaacaaactg
cgaaaagatattgtaaagcaaattacagaagaggctatcgctgaagttgaaaataacttt
ccgccagaagaaaacaaagtgttagtacttgcaaaagaaggttggaatccgggtgtaatt
gggattgtcgcttctaaattagttgaacgtttttatcgtccgactattgtattatgcatt
gatcctataaaagaaacagcaaaaggctcagcgcgtagtattgcaggatttgatttgttt
gcaaatttatcagattgtagagagttattgccacactttggagggcatccgatggcagcg
ggaatgacgctacatatgaatgatgtagatgaattacgtcgccgcttaaatgaacaagca
gatgcaattttaacagaagaagattttattccaattacagcagttgatgttttttgtaaa
gtagaggatgtaacactagcggcaattgaagatatgcaaaaactagccccgtttggtgtt
ggaaatccgaaaccacgtattgcagtgaaagatgcagagttagaaagtattcgcgcgatc
ggatcagatggctctcatttaaaaatggctcttcgtgatggacaagcaacactggataca
attggatttggttttggtgcatatgcgaaagaaatctctccagttgcaaaagtatctgta
ataggagaagcatccatcaatgaatggaataattttaagaagccacaattaatggtacaa
gatattgctgtagaggcgtggcaattatttgattggcgtagtatgcgtaatgcagaagca
aatttagcagaacttccgaaagaaaaaataacaatggtgtatttttctgaagaggtattg
aataaattttctttagagagctataaagaaaagctcatgcatgcttcagaagtaacgcat
ttagatgatcaatatatcgtgttacttgatttaccaaaaggaacagatgaattaagtgag
ctatttaaagtaggattcccagcgcgaatttatacgctattttatcaagagaataaccac
ttatttagtacagttccgacgagagaacactttaaatggtactattctttcttaagccaa
aaaacaccattttctttaagacaatatggagaacaactatgtcgtcataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gatggcgtcatttttatggcagacaaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagaaaaagaattggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtaatcataaagaagtagaacagttagggtaa
DBGET
integrated database retrieval system
