Bacillus thuringiensis serovar chinensis CT-43: CT43_CH4606
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Entry
CT43_CH4606 CDS
T01838
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03030
DNA replication
btc03410
Base excision repair
btc03420
Nucleotide excision repair
btc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT43_CH4606 (polA)
03410 Base excision repair
CT43_CH4606 (polA)
03420 Nucleotide excision repair
CT43_CH4606 (polA)
03440 Homologous recombination
CT43_CH4606 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btc03032
]
CT43_CH4606 (polA)
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH4606 (polA)
Enzymes [BR:
btc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT43_CH4606 (polA)
DNA replication proteins [BR:
btc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CT43_CH4606 (polA)
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CT43_CH4606 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT43_CH4606 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
WHD_BrxR
DNA_pol_P_Exo
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AEA18266
LinkDB
All DBs
Position
complement(4572587..4575220)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTYSEYKGGRQKTPPELSEQFPFIREMLDAFNVPRYELENYEADDIMGTLAKE
ASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEYTKEALFEKYSLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEEVYENLDQVSGKKLKEKLEENKEQALMS
KDLATIITDAPITVHVDDMAYKGYEASDVIPMFESLGFTSLLNKLGVTPEETAPAELDDI
TFDIVEEVTEEMLQQNSALIVEVQEDNYHKADIQGFGIQNENGCYFIQKDIALASDAFKA
WLANGEMRKHTFDAKRAIVALKWNGIDMQGIDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPELEVVAEHVARKVHVLYDVKQTFVEELKKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELVGRLKEMEQEIYKLAGTEFNINSPKQLGVILF
ENLNLPVIKKTKTGYSTSADVLDKLMDRHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDS
SKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWIMYAADYSQIEL
RVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSR
NFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKE
EIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtcgtattagtagatggtaataatatcgcgtatcgtgctttctttgca
ctaccgcttttaaataacgacaaaggtatacatacgaacgcaatttacggttttacaatg
atgttaatgagaatattagaggaagaaaagccaactcatatgttagtggcgtttgatgca
ggcaaaacaaccttccgtcataaaacgtatagtgagtataaaggaggacgtcaaaagact
ccacctgaattatcagagcagttcccgtttattcgtgagatgctggatgcattcaacgta
ccgcgttatgaattagaaaattatgaagcggatgatattatgggaacgctagcaaaagaa
gcgagtgaacaaggagcaagtgtaaaagttatttcaggagataaagatttacttcaactt
gtttctgataacacgcttgtatgtattccgcgaaaagggattacggaagtagatgaatat
acgaaagaagctttatttgaaaaatatagcttatcaccaaagcaaattatcgatatgaaa
ggtttaatgggagaccaatcagataatattccgggtgtaccaggagttggtgaaaaaacg
gcgattaaattgttaacacagtttggaacggttgaagaagtgtatgaaaatctagatcaa
gtaagcgggaagaaattaaaagaaaaactagaagaaaataaagaacaagctcttatgagt
aaagatcttgcgactattattacagatgcaccgattacagttcatgtggatgatatggcg
tataaaggatatgaagcaagtgatgtgattccaatgtttgagagtttaggatttacatct
cttttaaataaattaggcgttacgccagaagaaacagctccagctgaattagatgatatt
acatttgatattgtggaagaagttacagaagaaatgcttcagcaaaatagtgcacttatt
gttgaagtgcaagaagataattatcataaggcggacattcaaggctttggtattcaaaat
gaaaatggttgctactttattcagaaggatattgctcttgcatcggatgcatttaaagca
tggcttgcaaatggagaaatgagaaagcatacatttgatgcgaagcgagcaatcgttgca
ctgaaatggaatgggatagatatgcaagggattgactttgatctattaatcgctgcttat
ttacttgacccggctgatacagataaagatttccgtactgtagcgaaaatgaaagaaacg
catgctgtgaaatcagatgaagaagtttacggaaaaggtgcgaagcgtgctgttccagag
ttagaagtagtagcggagcatgtggctcgtaaagtgcatgtattatatgatgtaaagcaa
acattcgttgaagagttaaagaagaatgagcaatatgaactgtttacagagttagaattg
ccacttgcgcgtgtattagctgatatggaagtaaaaggtgtaaaagttgatacggagcgt
cttcgtaatatgggagaagaactcgtaggtagattaaaggaaatggaacaggaaatttat
aagcttgcgggaacagaatttaatattaattcaccgaagcagcttggtgtaattctgttt
gagaacttaaacttaccggttattaaaaagacgaaaacaggttattctacgtcagctgat
gtattagacaagcttatggatcgccatgaaattattccaaacattttacattatcgtcaa
ttagggaagctaaattcaacttatattgaaggtttactgaaagttgtacatgaagattca
tctaaaattcatactcgctttaatcaagtgttaacgcaaacaggtcgattaagttcaacg
gatccgaacttgcaaaatatcccgattcgattagaagaaggaagaaagattcgtcaggca
tttgttccatcagaagaaggttggattatgtatgcggctgattattcacaaatcgaactt
cgtgtattagctcatattgcaaatgataaagggctagttgaagcattccagcatgacatg
gatattcatacgaaaacagctatggatgtatttggcgttgaaaaagatgaagtaacttca
aatatgagacggcaagcgaaagctgttaacttcggaattgtgtatggtattagtgattat
ggtctttcacaaaacttaggaattacaagaaaagcagcagcggaatttattgaaaagtat
ttagaaagtttccctggtgtacaagaatacatggaggacatcgtaaaagatgcgaaacaa
aaaggatatgtggctacattattaaatcgtcgtcgttatattccagaaattacgagtcgt
aatttcaatttacgtagctttgctgagcgtacagcgatgaatacaccaattcaaggtact
gcagcagatattattaaaaaagcgatgattattatggcagatcgtttagaagaagaagga
ttacaagcgcgtcttcttctgcaagtacacgatgaattaatatttgaagcaccaaaagaa
gaaattgaaaaattagagcagcttgtacctgaagtaatggagcatgcgattgaactcgca
gttccgctgaaagttgattattcttacggtccaacttggtacgacgcaaaataa
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