Bacillus thuringiensis serovar chinensis CT-43: CT43_CH5372
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Entry
CT43_CH5372 CDS
T01838
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT43_CH5372 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btc03021
]
CT43_CH5372 (rho)
03019 Messenger RNA biogenesis [BR:
btc03019
]
CT43_CH5372 (rho)
Transcription machinery [BR:
btc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CT43_CH5372 (rho)
Messenger RNA biogenesis [BR:
btc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CT43_CH5372 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEA19026
LinkDB
All DBs
Position
complement(5312756..5314027)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFSILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPDSAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVESFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaagttaacgaaaaaagagttaatcttttctatt
ttgaaagctcgagcagaaaaagaaggtttctttttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactattctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagacaaagtttctggt
aaagtacgacctccgaaagaaaatgaacgctattttgggttattacaagttgaagctgta
aacggagatgatccagattcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgtatcatg
gatttaatcgcaccagttggatttggacaacgtggtttaattgttgcgcctccaaaggct
ggtaaaacaagtctattaaaagaaattgcacacagtgttacaacaaatcatccagaagca
gaattaattgtgcttttaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaagggcgacgttgtaagttctacttttgatgaagtaccagaaaatcatattaaagta
gctgaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagatgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaacctcgttattccgccaagtggt
agaacattatcgggtggtatcgacccagcggctttccatagaccgaagcgtttctttgga
gcggcacgtaatattgaagaaggcggtagcttaacgattttagcaacagcccttgttgat
acaggatctcgtatggacgatgttatttacgaggaatttaaaggaactggaaatatggaa
cttcacttagatcgttcgttagctgaacgtcgtatcttcccagcgattgatattcgtcgt
tctggtacacgtaaagaagatctattaattccaaaagagcatttagacaagttatggggc
attcgtaaaacaatgcgtgatacaccagactttgttgaaagtttcttacgtaagcttcgt
caaacgaagacaaacgaagaatttttacaaaacattgttgcagactcgaaaagatatgta
acaactaagtaa
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