Bacillus thuringiensis serovar chinensis CT-43: CT43_CH5379
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Entry
CT43_CH5379 CDS
T01838
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CT43_CH5379 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btc03021
]
CT43_CH5379 (rpoE)
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH5379 (rpoE)
Transcription machinery [BR:
btc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CT43_CH5379 (rpoE)
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CT43_CH5379 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
ColG_sub
GDH2_N
HTH_Crp_2
2Fe-2S_thioredx
Sigma70_r4
PPP4R2
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-ProteinID:
AEA19033
LinkDB
All DBs
Position
complement(5321193..5321732)
Genome browser
AA seq
179 aa
AA seq
DB search
MNFKQYSPEELKECSMIEVVHSVLGDKRQATTFNELVQEIAQVLGLSQEQVNAKLAQFYT
DLNIDGRFINLGENRWGLRSWYPYEQIDEEILPQPKPKKKRKVEEDGFDDYIEEDEDDFD
DADGNVDEEDDVEDLDKVLEDEDGDDDDLDDLEEDEDDDFAEEELEYDETEEEEEEEEL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttaagcaatattcaccagaagagctaaaagaatgttcaatgattgaagttgta
catagcgttttaggggataaaagacaagcaacgacattcaacgagttggttcaagaaatc
gctcaagtgctgggactatctcaagagcaagttaatgcgaaactcgcacaattttataca
gacttaaacatcgatggacgtttcattaatttaggagaaaatcgttggggactacgcagc
tggtacccatatgagcaaattgatgaagaaatcttaccgcagccaaaaccgaagaagaaa
cgtaaagttgaagaagacggttttgacgactacattgaagaagatgaagatgactttgac
gatgcagacggaaatgtagacgaagaagatgatgtagaagatttggacaaggttcttgaa
gatgaagacggagatgacgacgatcttgatgatttagaagaggatgaagacgacgacttc
gctgaagaagaacttgagtatgatgaaactgaagaagaagaagaagaggaagaactgtag
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