Burkholderia thailandensis MSMB121: BTI_2555
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Entry
BTI_2555 CDS
T02644
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
btd
Burkholderia thailandensis MSMB121
Pathway
btd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BTI_2555 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btd03400
]
BTI_2555 (recD)
Enzymes [BR:
btd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BTI_2555 (recD)
DNA repair and recombination proteins [BR:
btd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTI_2555 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
MukB
RecD_N
CbiA
Flavi_DEAD
UvrD_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGK46176
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All DBs
Position
1:complement(2805634..2808306)
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AA seq
890 aa
AA seq
DB search
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
SRATAAGHVCVSLRALAQRYDEPFADVRDALAASGVTAFDGIARGAECPLVVDRDGRLYL
ARYFDYETRLANALVARARSGGAAAGGAGELAPDALGERLVRYFGPQKERGVDWQRVAAL
VALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHRDLRIALAAPTGKAAQRMQEALHARAG
SLPAELATRLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLD
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPGFSSATCATIARALGIGEAEFVAALPD
GFVLDAADAANAGVSPDARAASVASGATARGAAGAAAPAARSTAAVAAAKVAPEAAAQRA
PAPRTGRRGGGRDSKRGVDDAQGALFAFDDEDAFGVDESGVDMPGVERPNLDHRDGRASP
DVTRSRRDALPARARPDSPDAPGIETATHMHAQAGEAIPADLPWDASSAEPAAWIEAGEL
EWLDNAVFSSPERASTDAGSGEQRPATATAAGAGARTPAGRAPAARAAADIEPQASTSAL
PAGAASPDVPSAAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTADDAA
ARFRDDGGATLSAATVEQLAQGFAGYAAALRDALAAPDPDPLPLFDVLNRFRVLCATRTG
ARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPDARG
ALRVWFHGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELV
YTAITRARSRVQVIGSRSVLALAIATRTARDSGLAARIADALRVRQEGAR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtcgacgaacgtttcgcatggacgggcggcctggcggaccgtctgcccgag
ccggccgatttcgggctcgcgctcgccgaaggcttcgcgcgccggatcgggatgttgtcg
cgccgcgtcggcgcgagcgccgcggccgcgcgctgggcggcgcgcgcggcgttcgccgcg
agccgcgcgacggcggcggggcacgtctgcgtgtcgctgcgcgcgctcgcgcaacgctac
gacgagccgttcgccgacgtgcgcgacgcgctcgccgcgagcggcgtgaccgcgttcgac
ggcatcgcgcgcggcgccgagtgtccgctcgtcgtcgatcgcgacggccggctgtatctc
gcgcgctacttcgactacgagacgcggctcgcgaacgcgctcgtcgcgcgcgcccggtcc
ggcggcgcggcggcgggcggcgccggcgaactcgcgcccgatgcgctcggcgagcggctc
gtccgctatttcgggccgcagaaggagcggggcgtcgactggcagcgcgtcgcggcgctc
gtcgcgcttacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacg
acggtcgtcggcgtgattgcgtgcctgctcgacgcgcaccgggacttgcggatcgcgctc
gccgcgccgaccggcaaggcggcgcagcggatgcaggaggcgctgcacgcgcgcgccggc
agcctgccggccgagctcgcgacgcgtctgccgcgcacgtcctatacgctgcaccggctg
ctgggcggcggcccgggcgggcgcttcgcgcatcaccgcgacaacccgctgccgtacgat
ctcgtcgtcgtcgacgaggcgtcgatgatcgacgtcgcgctcgccgcgcacctgctcgac
gcgctcgcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtc
gaggcgggcgcggtgtttgccgagctgagcgcgcgtcccggattcagctcggcgacgtgc
gcgacgattgcgcgcgcgctcggcatcggcgaggccgagttcgtggcggcgctgccggac
ggatttgttcttgatgcggccgatgcggcgaacgcgggcgtgagcccggacgcacgcgcg
gcttcggtcgctagcggcgcgacggcgcgcggggcggccggcgcggcggcgcccgccgcg
cgatcgacggctgccgttgccgcggcgaaggttgcgccggaagccgccgctcagcgcgcg
ccggcgccgcgcacgggccggcgcggcggcgggcgagactcgaaacggggcgtcgacgat
gcgcagggggcgctgttcgcgttcgacgatgaagacgcgttcggcgtggacgaatcgggc
gtcgatatgccgggcgtcgagaggccgaacctcgatcaccgggacggccgcgcatcgccc
gacgtcacgcgcagccggcgtgacgcgctccccgcgcgtgcccggccggattcgccggac
gcgcccggcatcgagactgccacgcacatgcatgcgcaggccggcgaagccatccccgcc
gatttgccgtgggacgcgtcttccgccgagccggccgcatggatcgaagcgggcgaactc
gagtggctcgacaatgcggtcttttcgtcgcccgaacgcgcttcgacggatgccggatct
ggcgagcagcgccccgcgactgcaacggcagccggcgcgggcgcacgcacgcctgccggc
cgcgcgccggctgcccgcgccgcggcggatatcgaaccgcaagcgtcgacgtcggcgctc
ccggccggggccgcgtcaccggacgttccctccgccgcgccgttgaccgactgcgtcgtc
tggctcgagcgcaactatcgcttcggcctcgattcgccgatcggcagactgtcgctcgcg
attcgccgcggcgccgtgcaggacgcgctcgatgcgttgtcgacggccgacgacgcggcc
gcgcgcttccgcgacgacggcggcgcgacgctgtcggccgcgacggtcgagcaactcgcg
caaggcttcgccggctacgcggccgcgttgcgcgacgcgctcgcggcgcccgatcccgat
ccgctgccgctcttcgacgtgctcaaccgctttcgcgtgctttgcgcgacgcgcacgggc
gcgcgcggcgcggacgaggtcaatgcgctcgtcgcggccgaggtgcgccgcgcggtgcgc
gtgccgctcgcgctcggcgcgcactggttcgccgggcggcccgtgatggtgacgcgcaac
gattacgcgctcggactcttcaacggcgacatcggcattgcgctgcccgacgcgcgcggg
gcgctgcgcgtctggttccacggcgcggacggccgcgcgcgcgcggtgtcgcccgccgcg
ctgccgccgcacgacacggcgttcgcgttgaccgtccacaaatcgcagggctcggagttc
gacgacgcggcgctgatcctgcccgcgtcgttcaaccgcgtgctgtcgcgcgaactcgtc
tataccgcgatcacgcgcgctcgctcgcgcgtgcaggtgatcggctcgcgctcggtgctc
gcgcttgcgatcgcgacgcgcacggcgcgcgactccggcctcgccgcgcggatcgccgat
gcgctgcgcgtccggcaggagggcgcgcgatga
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