Burkholderia thailandensis MSMB121: BTI_786
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Entry
BTI_786 CDS
T02644
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
btd
Burkholderia thailandensis MSMB121
Pathway
btd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTI_786 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btd03019
]
BTI_786 (pcnB)
Enzymes [BR:
btd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BTI_786 (pcnB)
Messenger RNA biogenesis [BR:
btd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BTI_786 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGK48904
LinkDB
All DBs
Position
1:complement(851615..853168)
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AA seq
517 aa
AA seq
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MIKKLIRKLLGQDARTTQDAPQDPAAPLEAEPAAPPAPSRAKSARGAAKKARNGEPAIVH
ANVHGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQ
RLFRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPQEPPADAAPAKRLKRDELDRRTH
AVDASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGD
PATRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLSG
HALACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFAT
LLWHDMRQRFEQYVANGEYPVPAINRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRLE
KRSGRSALRLLEHQRFRAGYDFLLLRCESGELDPAAGQWWTDFIDGDAAAREALLTQGGS
RDKSPRKRRRRGGRSRRTADSAESTEGAAHGESDAND
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaaaactcatccgcaagctgctcgggcaggacgcccgtacgacgcaagacgcg
ccgcaagacccggccgccccgctcgaggccgagcccgccgcgccccccgcgccgagccgc
gcgaaatccgcgcgcggcgccgcgaagaaggcccgcaacggcgagccggccatcgtgcac
gccaacgtgcacgggatcgatcccgcactcatctcgaaaaacgcgatccgcgtcaccgat
acgctgcagcaagccggctttcgtgcgttcatcgtcggcggcgcggtgcgcgacctgttg
ctcggcatcgcgccgaaggacttcgacgtcgcgaccgacgcgacgccgaccgaggtccag
cgcctgttccgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcagttc
ggccaggagctgatcgaggtgtcgacgttccgcgcgctcgtcgacgcgccgcaggagccg
cccgccgacgccgcgcccgcgaagcgcctgaagcgcgacgagctcgaccgccgcacgcat
gcggtcgacgcgagcgggcgcgtgctgcgcgacaacgtgtggggcgagcagcacgaggac
gcggcgcgccgcgacttcacgatcaacgcgatgtactacgacccggcgtcgcagaccgtg
ctcgattaccacgacgggatggccgacatgcgcgcgcgcctgttgcggatgatcggcgat
ccggcgacgcgctaccgcgaggacccggtgcggatgctgcgcgtggtgcgcttcgcggcg
aagctcggcttcgacatcgaggagaagacgcgcgagccgatcaaggagctcgccgatctg
atcaacaacgtgccggccgcgcgcctgttcgacgagatgctcaagctcctgctgtcgggc
cacgcgctcgcgtgcctgaagcagctacgcaagcaggggctgcaccacgggctgctgccg
ctcctcgacgtcgtgctcgaacagccgcagggcgagaagttcgtcacgctcgcgctgaac
aacaccgacgcgcgcgtgcgcgcgggcaagccggtgtcgcccggcttcctgttcgcgacg
ctcctctggcacgacatgcgccagcgcttcgagcagtacgtcgcgaacggcgagtacccg
gtccccgcgatcaatcgcgcgatggacgacgtgatcgacatgcagaccgagaagctcgcg
atccacaagcgctattcggccgacatgcgcgagatctggggattgcagttgcgcctcgag
aaacgctccggccgcagcgcgctgcgcctgctggaacaccaaagattcagagcggggtat
gatttcctcctgttacgctgcgaatccggcgagctcgatccggccgccggacaatggtgg
acggatttcatcgacggcgacgccgcggcgcgcgaggccctcctcacgcagggcggcagt
cgggacaagtcgccccgcaagcggcgccgccgcggcggacgcagccgccggacggccgac
agcgccgagagcacggaaggcgccgcgcacggcgagtccgacgcgaacgactga
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