Burkholderia thailandensis E264: BTH_I0088
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Entry
BTH_I0088 CDS
T00311
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bte
Burkholderia thailandensis E264
Pathway
bte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bte00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BTH_I0088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bte03021
]
BTH_I0088
Transcription machinery [BR:
bte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTH_I0088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_AsnC-type
HTH_28
HTH_3
HTH_31
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABC38558
UniProt:
Q2T2N0
LinkDB
All DBs
Position
I:complement(93414..94865)
Genome browser
AA seq
483 aa
AA seq
DB search
MKVSEREVRYEQGIDRLLELACARDDTEYAELADEFASAPSDTHAHAHDLGEPEFLDRHA
SDESAGTGSFGDKPTRAAHADADWHDGDVVDAQSSEPSDATPDDTAVSTDPLALFVRRMH
AVPLLTHAQEIALATEIEAGREQVLQALAETLDLLELASLPDDPALGRARAALQRARARG
DEGARAFARARKAAYAALAAHGWPSAEIDAMRRAMRRLPTPPEQGDAGALPAFADGEARI
SAATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEYRRGFKFSTYAT
WWIRQAISRAIADRARTIRVPVHVGDEARRVRKVADRIERRSGARASLAELSEATGLSAE
RLRAVLMLPREPRSLNAPLGDDDQAEFGDIVEDASTPSLFDALAQGQMCDVVTSLLKTMS
AQEADILRRRFGIGGDEPWSYEQIAAQAGVSREQIRRIEKRALQTLRITADACNARDFLD
AQP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctcagagcgcgaagtgcgctacgaacagggcatcgaccgattgctcgaactt
gcctgcgcccgcgacgacacggaatatgccgagctcgccgacgagttcgcgagcgcgccg
tccgacacacacgctcacgcgcacgacctcggcgagcccgagttcctcgatcgccacgca
tccgacgaaagcgccggcaccggttcgttcggcgacaagccgacgcgagccgctcacgcc
gatgccgattggcacgacggcgacgtcgtcgatgctcagtcgtccgaacccagcgacgcc
acgccggacgacaccgcggtctcgaccgatccgctcgcgctcttcgtgcgccggatgcac
gcggtgccgctgctgacgcacgcccaggaaatcgcgctcgccaccgaaatcgaggcggga
cgcgagcaggtgttgcaagcgctcgccgagacgctcgatcttctcgaactcgcgtcgctg
ccggacgatccggcgctcggccgcgcgcgcgccgcgttgcaacgcgcacgcgcccgcggc
gacgaaggggcgcgcgcgttcgcccgcgcgcgcaaagcggcgtatgcggcgctcgccgct
catggttggccgtcggcggaaatcgatgcgatgcggcgtgcaatgcgccggctgccgacg
ccgccggaacaaggcgatgcgggcgcgctgccggcgttcgcggacggcgaggcgcgaatc
tccgccgcaaccgcgagaatggcggaagcgaacctgcggctcgtgctgtcgatcgcgcgc
aaatatgcgtcgcgcggcctggatctcgccgatctgctgcaggagggcaacctcggcctg
ctgcgtgcgatcgagaaattcgaatatcggcgcggcttcaagttctcgacgtatgcgacg
tggtggattcgtcaggcgatttcgcgcgcgatcgcggatcgcgctcgcacgatccgcgta
ccggttcacgtcggcgacgaagcgcgccgcgtgcgcaaggtcgccgatcggatcgagcgg
cgcagcggcgcgcgcgcatcgcttgccgaactgtcggaggcgaccgggctgtcggccgag
cggctgcgcgcggtgctgatgctgcctcgcgagccgcgctcgctgaacgcgccgctcggc
gatgacgaccaggccgaattcggcgacatcgtcgaggatgcgtcgacgccgagcctgttc
gatgcgctcgctcaagggcaaatgtgcgacgtcgtcacgtcgctgctgaagacgatgtcc
gcgcaggaagccgacatcctgcgccggcgcttcggcatcggcggcgacgagccgtggagc
tatgagcagatcgcggcacaggcgggcgtgtcgcgcgagcagattcgccgcatcgagaaa
cgcgcgctgcaaacgctgcgcatcaccgccgacgcatgcaacgcgcgcgacttcctcgac
gcgcagccgtaa
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