Burkholderia territorii: WS51_27875
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Entry
WS51_27875 CDS
T04843
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
btei
Burkholderia territorii
Brite
KEGG Orthology (KO) [BR:
btei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btei03016
]
WS51_27875
Enzymes [BR:
btei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
WS51_27875
Transfer RNA biogenesis [BR:
btei03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
WS51_27875
Prokaryotic type
tRNA splicing ligases
WS51_27875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AOI67513
LinkDB
All DBs
Position
3:370037..371470
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AA seq
477 aa
AA seq
DB search
MDLMSLERHGEFEWHIPVQDRMRVPGIIYADRRLIQDMDDKVLVQIRNVACLPGIVGASY
AMPDAHWGYGFPIGGVAAFDPGSGGVISAGGVGFDISCGVRTLLTGLTRECVEPLKVRLA
DALFAHIPAGVGSTGAMHLSASKMDEMPTGGAAWAVDQGYGNRDDLVRIEENGRILHAKP
GAVSDLAKKRQRDEMGTLGSGNHYLEVQAITEIFEPRIAGTFGLHPGQVVVTIHCGSRGL
GHQIGTEYLREMVITAKSYGIDLPDRELACAPIASDLGERYLGAMRAATNCALANRQILT
HLTREVFATMFPDAVLTLLYDVSHNTCKKESHRVDGRERMLFVHRKGATRAFGPGHPELP
EGLRESGQPVLIGGSMGMASYVLAGAQTGDTERAFGSACHGAGRAMSRTEATRHWRGRAL
IDALAERGIEVRSRSDRGVAEEAPGAYKDVDAVVAAAASAGLARKVARLVPIACIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggacctcatgtcgctcgagcgtcacggcgaattcgaatggcatattcccgtgcaggac
aggatgcgggtgcccggcatcatctacgccgatcgccgactgatccaggacatggacgat
aaagtgctcgttcagatccgcaacgttgcatgtttgccgggcatcgttggcgcctcgtat
gccatgcccgacgcgcattggggttatggctttccgatcggcggtgtcgctgcgttcgat
ccaggatcgggcggagtcatctccgcaggaggagtcggtttcgatatttcatgtggcgtg
agaacactcttgaccgggttgacgcgtgagtgcgtcgagccgttgaaggtccgtctcgcc
gacgcacttttcgcgcatattccggcaggcgttggaagcaccggggcgatgcatctctct
gcatcgaaaatggacgagatgccgacaggcggcgcggcgtgggccgtagaccagggctat
ggcaaccgcgacgatcttgtgcggatcgaggaaaacggcagaatcctgcatgcgaagccc
ggcgccgtgtcggatcttgccaagaaacgtcagcgcgacgagatgggcacgctgggttcc
gggaatcactatctcgaagtgcaggcgatcactgagatcttcgagcctcggattgccggc
acattcggccttcaccccggacaggtggtcgtgacgatccactgcggttcacgcggactc
gggcatcagatcggcaccgagtatctccgagagatggtcattaccgcaaaaagctacggg
atcgatctgccggatcgcgagctcgcgtgcgctccgattgcgtcggatctgggcgagcgc
tatctcggtgcgatgcgtgcggcgaccaattgtgcgctggcgaaccggcagatcctcacg
catctcacgcgcgaagtgttcgcgaccatgttccccgacgctgtgttgacgctgctctac
gatgtgtcgcacaacacatgcaagaaagaatcgcatcgtgtcgatggtcgcgaacggatg
ttgttcgtgcatcggaagggcgcgacacgcgcgttcggccccggacatccggagttgccg
gaaggtctgcgcgagtcggggcaacccgtgttgatcggcggcagcatgggaatggcatca
tacgtactggcgggcgctcagacgggtgataccgagcgcgcattcggttcggcctgccac
ggcgcggggcgcgcgatgagccggacggaagcgactcggcactggcgcggccgtgcactc
atcgatgcactggccgagcgcggcatcgaggtgcgcagccgatccgatcgaggtgtcgcc
gaagaggcgccgggcgcatataaagacgtcgatgcggtcgtcgctgctgccgcgtctgca
ggtctcgcccgcaaggttgcacggctcgtgccgatcgcctgcatcaagggttag
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