Burkholderia territorii: WS51_29170
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Entry
WS51_29170 CDS
T04843
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btei
Burkholderia territorii
Pathway
btei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS51_29170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btei03019
]
WS51_29170
Enzymes [BR:
btei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WS51_29170
Messenger RNA biogenesis [BR:
btei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS51_29170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
B12-binding
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOI67733
LinkDB
All DBs
Position
3:complement(711685..713124)
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AA seq
479 aa
AA seq
DB search
MSFASLGLIDPLLRNLQGLNYQTPTPVQAKAIPAVLGGKDVMAAAQTGTGKTAGFALPLL
QRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFVEYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPVQR
QTLLFSATFTDDIRAMAASILRSPVNISVSPPNATASKIKQWVVPVDKRNKPDLFMHLVA
ENNWDHALVFVKTRNGVDYLAAMLNDAGYAVDTIHGDKPQPARLRALERFKAREVQMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLRREEEPGFEAEHRVPETSATGQIIKKPKKPKKPKVPQAGVGAMPVAGKKPRPQ
GGEGKRKPAGQRAGAVGKGASLSSGSPFSVQKPRGKPAGKAAAGSRKPAGKPAGGRGTR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcctcgctaggcctgatcgatcccttgctgcgtaatctgcagggcctcaat
taccagacacccacgccggtgcaggccaaggcgattcccgctgtgcttggcggcaaggac
gtcatggccgcggcacagaccggcaccggcaagacggcgggttttgcgctgccgctgctg
cagagactggtgcagcacgggccggcggtatccagcaaccgcgcgcgcgtgctggtgctg
gtgcccacgcgcgaactggctgaacaggtgctgcagagtttcgtcgagtacggcaagggc
ctcgacttgcgattcctggccgcctatggcggcgtgagcatcaacccgcagatgatgaag
ttgcgcaagggcgtggacgtgctggtcgccacgccgggccggctgctggacctcaatcgt
cagaacgccgtgcagttcgatcaagtgcagacgctggtgctcgatgaagccgaccgcatg
ctcgatctgggcttcgcccgcgagctcaacgccgtgtttgccgcgttgcccgtgcagcgc
cagacgctgctgttctccgcgacctttaccgacgatatccgcgcgatggcggcgagcatt
ctgcgcagtccggtcaacatcagcgtcagtccgccgaatgcaacggccagcaagatcaag
cagtgggtcgtgccggtggacaagcggaacaagcccgatcttttcatgcatctggtggcc
gagaacaactgggatcacgccctggtgttcgtcaagacccgcaacggcgtggattatctg
gcggccatgttgaacgatgcgggctatgcggtcgacaccattcacggcgacaagccgcaa
cccgcgcgtctgcgtgcgctggagcgcttcaaggcgcgcgaagtgcagatgctggtggcg
accgatgtggctgcgcgcgggctggatatcgacgacttgccgctggtgatcaacgtcgat
ctgccgatcgtggcgcaagactacgtgcaccgcatcggtcgtaccggccgcgcgggcgca
agtggtgtggcggtatccctcgtgtgcgcggacgaagcgccgcaactggccgcgatcgag
gcgttgatccggcaaacgctgcgtcgtgaggaagagccgggttttgaggcagaacatcgc
gtgccggaaaccagcgcgacggggcagatcatcaagaaacccaaaaaaccgaagaagccg
aaagtgccgcaggccggggtgggcgccatgccggtggcgggcaagaagccacggccgcag
ggcggggagggcaagcggaagccggcggggcagcgtgccggggccgtgggcaagggggcg
agcttgtccagcggaagcccgttcagcgtgcagaagccgcgcggcaaacccgcgggcaag
gcggccgcgggatcacggaaaccggctggcaagccggcgggcgggcgcggtacgcgttga
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