Burkholderia territorii: WS51_29215
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Entry
WS51_29215 CDS
T04843
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
btei
Burkholderia territorii
Pathway
btei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
btei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WS51_29215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btei03400
]
WS51_29215
DNA repair and recombination proteins [BR:
btei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WS51_29215
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WS51_29215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
AAA_21
SMC_N
nSTAND1
AAA_16
RsgA_GTPase
AAA_22
AAA_23
AAA_25
NACHT
AAA_18
Viral_helicase1
UvrA_DNA-bind
AAA_33
ATPase
DnaJ_CXXCXGXG
DUF4350
RNA12
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
AOI67741
LinkDB
All DBs
Position
3:complement(722463..728357)
Genome browser
AA seq
1964 aa
AA seq
DB search
MSSSNLIRIRGARQHNLKNLDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRRTARQVRHDTPETIYAELVERTRADDPRVVVTFPVELPESASEDEVAQWLSASGYT
RVQAQREVASPTGPRKLLDVVADRFRVQQADKVRVVEAIEASLKRGGGRVNVYVLGAEAD
NALAEPQIWRFSTGLHDPDSDLRYAEPQAALFSFNSAYGACETCRGFGRVIGVDLGLVIP
DARKTLRGGAIKPMQTPAWKECQDDLMRYAAKADIRRDTPWSDLTDAERDWVINGSPDWN
GKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCEVCGGARLKTESLQWRLGSKA
NADAVLAPADRFMPRGVEWTRAQLEALPGLTVHDLMLLPIERIRRFFDEITLPSALLDDA
LKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVLDEP
SIGLHPRDLTRIVEAMQRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIVYDG
TPGDIRSAHTLTGEYLGGRKHVAHASNWARRPVDANTPRIVLEGATEHNLRDVTVEIPLQ
RLVCVTGVSGSGKSTLLQDVLYPAMARHHGKATESPGAYRSLTGADQVGDVVFVDQSPIG
KTTRSNPASYVGAFDEIRKLFAKAPLALQRGYGAGTFSFNSGDGRCPTCGGSGFEHIEMQ
FLSDVYLRCPDCDGSRYRAEILEVRIERAGRALNIADVLDLTVSEAAAFFATDAEVLRVL
QPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAAAAGGRRIASEEARIARAKLFM
FDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVIRAADWLIDLGPEGGDGGGLV
LCAGTPDDVKACAQSHTGVALLQYDRAMDGETTLADEGVPLQAVLNAARERRAIEGEDVV
RIVNAREHNLKALDVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRYLESLNAYARSI
VQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCIHDG
TPVTSQTVESIAAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGSTHLRVDGEFV
TVDPWPKLDRFREHTIELPVADIVVSPDNEAELRRVLDETLELGKGVMHLLAPLDGLHHA
MQNERSTARVGEIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGVTLTREQ
RAAYDDTILAGDERGREQTLPSDEQEPEGIGNEPCPDCGGTRLNPAARAVTFDAHPIVEV
AQWTVSDTRRWIDTLKLTGRDAQIARDIVSEIGSRLAFLEEVGLGYLSLDRAAPSLSGGE
AQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLDALRKLGDKGNTLVVVEHDEDTI
RRADHIIDVGPGAGKRGGALVAEGAVADLAAQPDSVTGRLLAHPMTHPLQPRRAVSLPGK
SGAPAVPEGWLTVHGATLHNLRDVTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLLDAV
GRSVLSSPATRRARKAAQQDAPATNRRSSVLARSAPRPSLNVTHAWQGCERLSGWERIDR
VLEVDQTPIGKTPRSCPATYIGVWDTIRKLFADTLEARARGYTASRFSFNTGDGRCPACE
GQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVEFFAPIS
NIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELTKVRDDVTRRGQKAPHTLYV
LDEPTVGLHMADVAKLIRVLHRLVDGGHSVVVIEHDLDVIAEADWIIDLGPEGGVGGGTI
VAAAPPEGLAQVKASHTGQALKPVLARTAAQEGEAVRQGEARVG
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccagcaatctgatccgcattcgcggagcacgtcagcacaacctcaagaacctc
gatctcgacctgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag
tcgagcctcgtgttcgacacgctgtacgcggaaggccagcggcgctacgtcgaaaccttc
agcgcgtatgcgcggcagttcctggaccggatggaccgcccgcaggtcgagcgcgtcgac
ggcgtgccgcccgcgatcgcgatcgaccagaccaacccggtccgcagttcgcgctcgacc
gtcggcacgatgaccgagctcaacgatcacctgaagctgctgtacgcgcgcgcggccgag
ctgttcgatcgccggaccgcgcggcaggtgcggcacgacacgcccgagacgatctacgcg
gaactcgtcgagcgcacgcgcgccgacgatccgcgcgtcgtcgtcacgtttccggtcgag
ctgccggaaagcgcgtccgaagacgaagtcgcgcaatggctgtccgcgagcggctacacg
cgcgtgcaggcgcagcgcgaagtcgcgtcgcccacgggcccacgcaaactgctcgacgtg
gtggccgaccgcttccgcgtgcagcaggccgacaaggtacgggtagtcgaggcgatcgag
gcgtcgctcaagcgcggcggcggccgcgtgaacgtctacgtgctcggcgccgaagccgat
aacgcgctcgccgagccgcagatctggcgtttttccaccgggctgcacgaccccgacagc
gacctgcgctacgcggagccgcaggcggcgctgttctcgttcaactcggcgtacggcgca
tgcgaaacctgtcgcggcttcggccgcgtgatcggcgtcgatctcggcctcgtgattccc
gacgcgcgcaagacgctgcgcggcggcgcgatcaagccgatgcagacgcccgcgtggaag
gaatgccaggacgacctgatgcgctacgcggcgaaggcggacatccgccgcgacacgccg
tggtccgacctgacggacgccgagcgcgactgggtgatcaacggctcgccggactggaac
ggcaagtggcagagccagtggtacggcgtcaaacgcttcttcggctatctcgagtcgaag
gcgtacaagatgcacatccgcgtgctgctgtcgaagtaccgcagctacacgccgtgcgaa
gtgtgcggcggcgcgcgcctgaagacggaatcgctgcagtggcggctcggctcgaaggcg
aacgccgatgcggtgctcgcgcccgcggatcgcttcatgccgcgcggcgtcgaatggacg
cgcgcgcagctcgaggcgctgccgggcctgacggtacacgacctgatgctgctgccgatc
gagcgcattcgccgcttcttcgacgaaatcacgctgccgagtgcgctgctcgacgatgcg
ttgaagctgctgctcgccgaggtgcgcacgcgcctgaaatacctgtgcgacgtgggcctc
ggctacctgacgctcgatcgccagagccgcacgctgtcgggcggcgaggtgcagcggatc
aacctgaccaccgcgctcggcacgtcgctgaccaaaacgctgttcgtgctcgacgagccg
agcatcggcctgcatccgcgcgacctcacgcggatcgtcgaggcgatgcagcggctgcgc
gacgcgggcaatacgctggtggtcgtcgagcacgatccgtcggtgatgctcgcggccgac
cggctgatcgacatgggcccgggccccggcgagcgcggcggcacgatcgtctacgacggc
acgccgggcgacatccgttccgcgcacacgctgacgggcgagtatctcggcggccgcaag
cacgtcgcgcatgcgtcgaactgggcgcgccgcccggtggacgcgaacacgccgcgcatc
gtgctcgaaggcgcgaccgagcataacctgcgcgacgtgacggtcgagatcccgctgcag
cggctcgtgtgcgtgacgggcgtgtcgggttccggcaagtcgacgctgctgcaggacgtg
ctctatccggcgatggcgcggcaccacggcaaggcgaccgagtcgccgggcgcatatcgc
agcctcacgggcgccgaccaggtgggcgacgtcgtgttcgtcgaccagtcgccgatcggc
aagaccacgcggtcgaacccggccagctacgtcggcgcgttcgacgagatccgcaaattg
ttcgcgaaggcgccgctcgcgctgcagcgcggctacggcgccggcacattcagcttcaac
tcgggcgacggccgctgcccgacctgcggcggctccggcttcgagcacatcgagatgcag
ttcctgagcgacgtctacctgcgttgcccggattgcgatggcagccgctaccgcgccgag
attctcgaagtgcgcatcgagcgagcgggccgcgcgctgaacatcgccgacgtgctcgac
ctgaccgtcagcgaagcggccgcgttcttcgcgaccgatgccgaggtgctgcgcgtgctg
cagccgatcgtcgacgtcggcctcgaatacgtgaagctgggccagccggtgccgacgctg
tcgggcggcgaagcgcagcggctgaagctggccgggttcctcgccgaatcggccgccgcc
gcgggcgggcgccggatcgcgagcgaggaggcgcgcatcgcgcgcgcgaagctgttcatg
ttcgacgaaccgacgaccgggctgcacttcgacgacatcgcgaagctgatgcgcgcgttc
ggcaagctgctcgcggccggtcattcgctgatcgtgatcgagcacaacctcgacgtgatc
cgcgcggccgactggctgatcgatctcggcccggagggcggcgacggcggcggcctcgtg
ctgtgcgcgggcacgcccgacgacgtgaaggcatgcgcgcaatcgcataccggcgtcgcg
ctgctgcagtacgaccgtgcgatggacggcgaaaccacgctcgccgacgagggcgtgccg
ctgcaggccgtgctgaacgccgctcgcgagcggcgcgcgatcgagggcgaggatgtcgtg
cgcatcgtcaacgcgcgcgagcacaacctgaaggcgctcgacgtcgatatcccgcatggc
aagttcaacgtgatcaccggcgtgtccggttccggcaagtcgacgctcgcgttcgacatc
ctgttccacgaaggccagcgccgctatctcgaatcgctgaacgcatacgcgcgctcgatc
gtgcagccggccgggcggcctgaagtcgatgcggtgtacggcattccgccgacggtggca
atcgagcagcggctgtcgcgcggcggccgcaagagcacggtggcgaccacgtccgaagtc
tggcacttcctgcggctgctgtacgtgaagctcggcctgcagcattgcatccacgacggc
acgcccgtcacgtcgcaaaccgtcgaatcgatcgccgcgcagctgctgcgcgaccatcgc
ggcgaacatgtcgggttgctcgcgccgctcgtcgtcaaccgcaagggcgtgtataccgat
ctcgcgaagtgggcgaaggcgcgcggcagcacgcatctgcgcgtcgacggcgagttcgtg
acggtcgatccgtggccgaagctcgaccgtttccgcgagcacacgatcgaattgccggtg
gccgacatcgtcgtgtcgccggacaacgaagccgagttgcgccgcgtgctcgacgaaacg
ctcgagctcggcaagggcgtgatgcatctgctcgcgccgctcgacgggctgcaccacgcg
atgcagaacgagcgctcgacggcgcgcgtcggcgaaatcaaggtgctgtcggtcaagcgc
gcgtgcccggtgtgcggcacgagctacccggaactcgatccgcggatgttctcgtacaac
agcaagcacggctggtgcaccacctgcgtcggcacgggcgttacgctcacgcgcgagcag
cgcgccgcgtacgacgacacgatcctcgccggcgacgagcgcggccgcgagcagaccttg
ccgtcggacgagcaggagccggaaggcatcggcaacgagccgtgcccggattgcggcggc
acgcgcctgaacccggccgcgcgcgcggtcacgttcgatgcgcatccgatcgtcgaggtc
gcgcagtggacggtgtccgatacgcgccgctggatcgatacgctgaaactgacggggcgc
gacgcgcagatcgcgcgcgacatcgtcagcgagatcggcagccgcctcgcgtttctcgaa
gaggtcgggctcggctatctgagcctcgatcgtgcggcgccgagcctgtcgggcggcgaa
gcacagcggatccggcttgccgcgcagctcggcagcaacctgcagggcgtgtgctatgtg
ctggacgagccgaccatcggcctgcatccgcgcgacaaccagatcctgctcgatgcgctg
cgcaagctcggcgacaagggcaacacgctcgtcgtggtcgagcatgacgaggacacgatc
cgccgcgcggatcacatcatcgatgtcggcccgggcgccggcaagcgcggcggcgcgcta
gtcgccgagggcgcggtcgccgatctggccgcgcagccggattcggtcaccgggcgtttg
ctcgcgcacccgatgacgcacccgctgcaaccgcgtcgcgcggtgagcctgccgggcaag
agcggtgcacccgcggtgccggaaggctggctcaccgtccacggcgcgacgctgcacaac
ctgcgcgacgtcacggtcggcatcccgctggcacgcctcgtcgcggtgacgggcgtcagc
ggctccggcaagtcgacgctcgcgcgcgacgtgctgatgacgaacctgctcgacgcggtc
ggtcgttcggtgctgtcgtcgccggccacgcggcgcgcgcgcaaggccgcgcagcaggac
gcgccggccacgaaccggcgctcgagcgtgctcgcgcgcagcgcgccgcggccgtcgctg
aacgtcacgcacgcgtggcaaggctgcgagcggctgagcggctgggaacggatcgaccgc
gtgctcgaagtcgaccagacgccgatcggcaagacgccgcgctcgtgcccggccacctac
atcggcgtgtgggacacgatccgcaagctgttcgcggatacgctggaagcgcgcgcgcgc
ggctacacggcatcgcgtttctcgttcaacaccggcgatgggcgatgcccggcttgcgaa
ggacaaggcgtgcgcacgatcgggatgagcttcctgcccgacgtgaaggtgccgtgcgac
gtgtgccacggtcagcgcttcaatccggagacgctcgcggtcacgtggcgcggccggaac
atcggtgatgtgctgacgatggaaatcgacgaagcggtggaattcttcgcgccgatttcg
aacatcgcgcatccgctgcagctgatgaaggacgtcggcctcggctatctgacgctcggc
cagccgtcgccgacgctgtccggcggcgaggcgcagcgcatcaagctcgtcaccgagctc
acgaaggtgcgcgacgacgtcacgcggcgcgggcagaaggcgccgcacacgctgtacgtg
ctcgacgagccgacggtcggcctgcacatggcggacgtcgcaaagctgattcgcgtgctg
caccggctggtcgacggcgggcacagcgtggtcgtgatcgagcatgacctcgacgtgatc
gccgaagccgactggatcatcgatctcggtccggaaggcggcgtgggtggtggcacgatc
gtcgcggccgcgccgcccgaagggctcgcgcaggtgaaggcgagccataccgggcaggcg
ctcaagcccgtgctggcgcgaacggcggcgcaggagggtgaagcggtgcggcagggagaa
gcgcgggtcggttga
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