Bombus terrestris (buff-tailed bumblebee): 100642805
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Entry
100642805 CDS
T04364
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100642805
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100642805
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100642805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
DEAD
OB_NTP_bind
HA2_C
AAA_22
nSTAND3
AAA_19
HA2_N
ATPase
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100642805
NCBI-ProteinID:
XP_012164666
UniProt:
A0A9B2MKU5
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All DBs
Position
6:3728985..3734084
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSRYKSNNKFRHKYQYDDEQKKSKYDSKLPYSTDYDKKGILDQKSDFSQEITNKNTEDF
YFNKYKHELNKIFSGNLNVIQDTDDFWRFVNKYETVQKKLKTPDILPNFSLNTIGVPETY
HKLHCINFKLSYNFNELFARVMPVKALTKERLLKFQNIIILYLDFKQKEKFAKLKKLRKS
QVNLPVYQYKHEIIETIKQEQVVIIAGDTGCGKSTQVPQYLYAAGFQKIACTQPRRIACI
SLAKRVAFETLTENCNDVGYQIRFEKQRNQNTKITFITEGLLLRQLSGEFELLPYDVIVL
DEVHERHLHGDFLLGIMKCIINQRQDLKLVLMSATINIELFNNYFSKENVKVIQVPGRLY
PIQLLYRPVTIEDIRYKNDRFNPSPYIQIMQIIDQKYPAEEKGDLLIFLSGMSEITAVVD
AAKEYSQKKNNWIILALHSTLAISEQDKVFDFAPEGVRKCIVSTNIAETSITIDGIRFVA
DSGKVKEMSYDPSCKMQRLKEFWISKASAEQRKGRAGRTGPGVCYRLYSEEEYMSLEKYS
TPELQRVPLDSLLLQMIAMGLPDARKFPFIEPPSPENIENSILSLKEHGALTDNEKITCI
GKTLARLPVDITIGKMLIMGSIFHQVEPVLSLAAALSIQTPFTNRAYRDSECETSRKKLE
SDHGDPITLLNAFREWLEVKQQSSQESRGSGNSSRKWCKRRGLEEQRFYEMTKLRAQFKE
LLQDCKLLRSLPEPNSSMSSAERAIRHGELKLLKSLKRTYKQSEPRKRKQLKLESFDIQL
EDNDHDDGEIDIKDIEFRMKNDPNQVQNLLTAATACSYKDLTMLKLILCSGLYPQFACAD
EFNYCKTTNEQLFHTKAKPYIALHPMSFFGNHPQVLQLEEADIVSIPGFKSKTAVSPKHT
ILTYLSLLETTKPYLVNTLRMPAAQTLLLFTREIDTNSTFSIIVCDSWLELKFPIPDSGQ
ILLMKATKLRHKWDFLLNQQLQDSSTSNDENQDFSEFEYTLTRDLIEYMHTTVPYTLKRL
LPADLKTIYVGCGENNILIDPNPFQSDFVVIPNSIKGGVRVTNTITYNCVKETEWSDQLS
TEILVTQWHCSNCNMQAILTSIEKLQHQQSCVKADIKDVEKHDSIKRKPNAQAYECPDCA
QILYLTPIEILKHKKSHVK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgatacaaatctaataataaatttaggcataaatatcaatatgatgatgaa
caaaagaaaagtaaatacgattcaaaattgccatacagtacagattatgataaaaaaggg
attttggaccaaaaaagtgatttttctcaagaaatcactaataagaataccgaagacttt
tattttaataaatataagcatgaattgaataaaatattctctggaaatttaaatgtaatc
caggatactgatgatttttggagatttgttaataaatatgaaactgtacagaaaaaacta
aaaactccagatattttacctaatttttcactaaatactatcggtgtgccagaaacatat
cacaaattacattgcataaatttcaaattaagttataattttaatgaattatttgcacgt
gtaatgccagttaaagcattaacaaaagaacgcttattaaagtttcagaacataattatt
ttatatttagactttaagcaaaaagaaaaatttgccaagctaaaaaaactcaggaaatca
caagtaaatctaccagtttatcaatataaacatgaaattattgaaacaataaaacaggaa
caggtagttataatagctggtgatactggttgtggaaaatccactcaagtgcctcaatac
ttatacgcagcaggttttcaaaaaattgcttgtacacaaccaagaagaatagcttgtata
tctttagcaaaacgtgttgcttttgaaacattaacagaaaactgcaatgatgttggttac
caaattcgttttgaaaagcaaaggaatcaaaataccaaaattacatttataacagaaggt
cttttgttaagacagttatctggagaatttgaattattaccttatgatgtaattgttttg
gatgaagtgcatgaacgtcacctacatggagattttcttcttggtattatgaaatgtatt
attaatcaaaggcaagatctaaaattagtacttatgtctgctacaattaatattgaactt
tttaataattatttttcaaaagaaaatgttaaagtaatacaggttcctggaaggttgtat
cctattcagttattgtacaggcctgttactatagaagatattcgatataaaaatgataga
ttcaatccaagtccttatatacaaataatgcaaataattgatcaaaaatatccagctgaa
gaaaaaggcgatttattaatatttttaagtggaatgagtgaaattactgcagttgtagat
gcagcaaaagaatatagtcaaaaaaagaataattggattatcttagcacttcacagcact
ctagctattagtgagcaagataaagtatttgattttgctcctgaaggagtgagaaagtgt
attgtatctactaacattgctgaaacttctattactatagatggaataagatttgttgct
gacagtgggaaagtaaaagaaatgagttatgacccatcatgcaaaatgcaacgactcaaa
gaattttggattagtaaagctagtgcagaacaacggaaaggaagagctggtagaactgga
cctggagtatgttatagattatactctgaagaagaatatatgtctttggaaaaatactca
actcctgaattacaacgtgtacctttagattccttacttctacaaatgattgcaatggga
cttccagatgcgcgaaaatttccattcatagaaccaccttcaccagaaaacattgaaaat
tctatattatctttgaaagaacatggtgcgctaacggataatgaaaaaataacatgtatt
ggaaaaacacttgcacgcttacctgttgatataacaatagggaaaatgttaataatgggt
tctatttttcaccaagtagaaccagtcttgtcattagctgctgccttaagtatacaaaca
ccatttacaaatagagcatatagggattcagaatgcgagacatctaggaaaaaattggaa
tctgatcatggtgatccaataacattactaaatgcatttagagaatggttagaagtaaaa
caacaaagttcgcaagaatccagaggtagtggtaacagtagtagaaaatggtgtaaaaga
agaggtttagaggaacagagattttatgaaatgacaaaattgagagcacagtttaaggaa
ttacttcaggattgcaaattactgagaagcctcccagaaccaaattcttctatgtccagt
gcagaacgcgctataagacatggagagcttaaacttttaaaatcattaaaaagaacctac
aaacaaagtgaacctagaaagcgaaaacaattaaaactagaatcatttgatattcaatta
gaagataatgatcatgatgatggtgaaattgacataaaagatatcgaatttcgaatgaaa
aatgatccaaatcaagtgcaaaatctattaacagcagccactgcatgtagctataaagat
ttaacaatgttaaaattaatactctgcagtggtttatatccacaatttgcatgtgctgat
gaatttaattattgtaagacaacaaacgagcaactgtttcatacaaaagcaaaaccatat
attgctttacacccaatgagtttctttggaaatcatcctcaagtattgcaattggaggaa
gctgatattgtatcaataccaggctttaaaagtaaaactgccgttagtccaaaacataca
atattaacatatttatctcttttggagacaacaaagccttatctagtgaatacacttaga
atgcctgctgcacaaacattacttttatttacacgtgaaatcgacacaaatagtacattt
tcaataatagtatgtgattcctggttagaattaaaatttcctatacctgatagtggtcag
attttactgatgaaagctaccaaattacgacataaatgggatttcttattaaatcaacaa
ttacaagattcaagtaccagcaatgatgaaaatcaggatttcagtgaatttgagtataca
cttactcgggatttaattgaatatatgcatactactgttccatatacactaaaacggctt
ttaccggctgatcttaaaacaatatatgtgggatgtggtgaaaacaatatattgatagat
ccaaatccttttcaatcagattttgtagtaatacccaactcaattaaagggggagttcgc
gtaacaaacactattacatataattgtgtgaaagaaactgaatggagtgatcaactttct
acagaaattttagtaacacaatggcattgttcaaattgtaatatgcaagcaattctaaca
agcatagaaaaattacaacaccaacaatcctgtgttaaagcagatataaaagatgttgaa
aaacatgacagtattaaacgtaaacctaatgcacaagcatatgaatgtcctgattgtgca
caaatattatacttgacaccaattgaaattcttaaacataaaaaatctcatgttaaataa
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