Bombus terrestris (buff-tailed bumblebee): 100642863
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Entry
100642863 CDS
T04364
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bter03009
]
100642863
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
90S particles
Other 90S particles
100642863
Pre-60S particles
Other pre-60S particles
100642863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
UTP20
Ig_GEX2_N
Lipid_desat
YdjC
DUF1265
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
100642863
NCBI-ProteinID:
XP_012172330
UniProt:
A0A9B2MQ15
LinkDB
All DBs
Position
15:10969113..10975763
Genome browser
AA seq
1296 aa
AA seq
DB search
MGKLGPRLSSRKKAKRWPKGQSSSSNPQTKKHREQASWIFFKDSTASAKPGITKEDLKKH
NAIQGIEPQVETLDSEGNSWETCTENTADTFATNYSNCSNISFSRFLNHFQSKSLLHKEM
LAVLSAVTEIIKQHGGNESSTEYFAALMSTLEAIESDTSIAATLSLLGMGLKTVPKNVLN
IQFGAASRIFLNILVKYASSEEYLILRHCIHCLSVLLRAQEAATWSSSSTMQVLDVILSF
TIHYKPKLRKSAQHGICAILNGSDIMKSENPSQYHPATPYIAKFCIGQLDSKSDGITNVL
HVLTLLKDIFHHLPKIHVKTISESLLKLMTMKNVLVTSCCLQTFHGLFVSRPSEAILPVQ
RNGQIITALYDYQPPATDTQPTLAWLTVMQEAYLNLAHNSLNLCAVLLPRILDRCMQLWL
SDKSEVISGSSHTIKILLQDCVGKICETEESMKTYKDTINQITFMIHQALGYQYLEAWYH
ILHLIALLFQVTGKARSPQLIEILKTLAELRDSYNFASKNDAEYAIGAAIRVLGPETILN
LIPLKVSDNAINLKRTWLLPLLKDCVLGGSLTFFMEILLPIVALCEKKATEPVGGKTYEF
LVCQIWAILPSICNNATDVKDNFKNIARLLGTNLNERKNLRMSIMSALRRLITKAVEDDK
KEDIHELARFAKNYLPLFLNLYTTKPLGTDEEGQRFATYDTIRVYLTITDKELVHELFDR
ALFKLKEPDIDDFFKESIHDIIRLFINYTDINRLKTFYDMSVPLLKEISKTKEQKKAYRF
LEEICGSEKETCKEFVVQYRREIQKLLISSATEVAKPSRGARLRCLIHLIKIHPQLEKTK
FLEAIVPEAVIYLKDLNTKCRTSAYQLLNTIAEKFLQNPTNLKEYVNMLMVGLSGAIENI
QKYCTASLLALSSITYHYNGSLGIETVKEILGQACIFVTSPTREIAEAALAYIKVYITVI
PSHIAASNLKLLIDGLCAMNDDCHRHFRQKVRDILVKLIRKYGMETISGMIPASNAMLHK
RLKNMNKAEEAKKKKNELRKLKKQENDEDTEFSAKRKPKSMEEILADSDDEFDEDMDNEE
SRKKKKRTSRKEAWIHENEEIVDLVDPAAARNISTTQPTVAINSKIAAIKRKDREFKTTS
DGRLIITVDNEKDNEPEPKRKKKSALLLHSDSEDDYEDDVQSVAMSQAMDKKRKYSDSYD
NISVRSGSTLKYQAGGSGIHRPLKKSRTEYIPGAEYKASKAGGDVKRKGKPDPYAYVPLS
RAALNKRKKKKNASKFQNIIKGAKKGAKIGMKQRKN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattgggaccgcgtttaagtagccggaaaaaggcgaaacgttggccgaagggt
cagagctccagttctaatccacaaactaaaaagcatcgggaacaggcatcctggatattc
tttaaagattcaacagcctctgcgaagcctggtataacaaaggaagatttaaaaaaacac
aatgctattcaagggattgaaccacaggtagaaacacttgatagcgaaggtaactcttgg
gaaacatgcacagaaaatactgctgatacctttgctaccaattatagtaattgttcaaat
atatcatttagtaggtttttaaatcattttcaatcgaaatcactgttgcataaggaaatg
ttagctgtgttgtctgctgtaacggagattataaaacagcatggtggtaatgaatctagc
acagaatattttgctgcattgatgagtactttggaagcgattgaatcggatacatcaatc
gcagctacactctctttattaggcatgggcctaaaaactgtcccaaaaaatgttttaaat
atccaatttggagctgcaagtagaattttcttaaatatcctagttaaatatgcatcgtcg
gaagagtacctaatacttcgacattgtattcattgtttatctgtgctccttcgagcacaa
gaagcagccacatggtctagttcatctacaatgcaagtgttggatgttattttgtcattt
actatacactataaaccaaaattaagaaaatcagcacaacatggaatatgtgctatatta
aacggaagtgatatcatgaaaagtgaaaacccatcgcaatatcatccagctactccatac
atcgcaaaattctgtattggtcaacttgattccaagtccgatggtattacaaatgttctc
catgtccttacactactaaaagacattttccatcatttaccaaagattcatgtgaagact
atcagtgaatctttattgaagcttatgactatgaaaaatgtgttagtaacttcatgttgt
ctacaaacctttcatggtttgttcgtttctcgaccatcagaagctattctaccagtacaa
agaaatgggcaaatcattactgccttatatgattaccaacctccagcaactgatacacaa
ccaactttagcgtggctaactgtaatgcaagaagcatatttgaatttagcccacaattca
ttaaatttatgcgcagttctgttaccaagaattttagacagatgcatgcaattgtggctt
tcggacaaatcagaagttatatctggttcttcgcacacgataaaaattttattacaagac
tgtgtcggtaaaatatgtgaaaccgaagaatcaatgaaaacatataaggacactatcaat
cagataacttttatgatccatcaagcattaggttatcagtatttggaagcttggtatcat
attcttcatttaatagccctactgtttcaggtaactggtaaagcgagaagtccgcaatta
atagagatattaaaaactctagctgagttacgtgattcttacaattttgcatcgaaaaat
gacgctgagtacgctattggagctgcgataagagtactaggaccggagacaatattaaat
ttgattccattgaaggtatcggacaatgcgattaatttaaaaagaacttggctactacca
ttactgaaagattgcgtgctaggtggatcacttactttcttcatggaaatattactacct
atcgttgcattgtgcgaaaaaaaagcaaccgaacctgtaggcggcaaaacttacgaattt
ctcgtttgccaaatctgggctattttaccaagtatatgcaacaacgctactgatgtgaaa
gataatttcaagaatatagctagactgttaggaacaaatttaaatgagagaaagaattta
aggatgtcgataatgtctgccttacgaagattaataacgaaagcagtcgaagacgacaaa
aaagaagatatacacgaactagctagatttgcaaagaattatttaccattgtttttaaat
ctatacactactaagccacttggaactgacgaagaaggacaacgctttgctacatatgat
acaataagggtgtatcttacaattacggataaggaattggtacacgaattattcgatcgt
gcgttatttaagttaaaagaacctgatatcgacgattttttcaaagaaagtattcacgat
ataataagattatttattaattatactgacattaacagattaaagacgttttacgatatg
agtgtacctcttcttaaagaaatttctaaaaccaaggaacagaagaaagcatataggttt
ttagaagagatatgtggcagtgagaaggaaacatgtaaagagtttgtagttcaatacaga
cgggagatacaaaaattattaatatcctcagctactgaagtcgcaaaaccaagcagagga
gcacgattaagatgcttaattcatctgatcaaaattcatccacaacttgagaaaactaaa
ttcttagaagccattgtgcccgaagcagtaatctatttaaaagatttaaatacgaaatgt
cgaacttctgcatatcaacttttaaacactattgccgagaaatttctacaaaatcctaca
aatcttaaagaatatgttaatatgctcatggttggtttgagtggtgcgatagaaaatata
caaaagtattgtaccgcatccttgctggcactttcctctatcacttatcattacaacgga
tctttaggtatagagacagttaaagaaatcttgggacaagcttgtatttttgttacaagt
ccgacgagagaaattgcagaagccgcattggcatatatcaaagtctatattactgtgata
ccatctcatattgctgcttcgaatttaaaattgttgatagacggtttatgtgcaatgaac
gatgactgccataggcatttcagacaaaaagtacgagatattctagtaaagttaataaga
aaatatggaatggaaacaatttctggcatgattccagcttctaatgcgatgttacataag
agattgaaaaatatgaataaggcagaagaagcaaagaaaaagaaaaatgaattgaggaaa
ttgaaaaaacaagaaaatgacgaggatactgaattcagtgcaaagagaaaacctaaaagt
atggaagaaatattggcggatagcgatgatgagttcgatgaagatatggacaatgaagag
tcaaggaaaaagaagaaaagaacatcgcgaaaggaagcctggattcatgagaatgaagag
attgttgatctcgttgatcctgcggctgctcgaaatatatcaacaacgcaacctacagtc
gctataaattcaaaaatagcagctataaaacggaaagatcgtgaatttaagactacatct
gatggtcgtcttattatcacagtagataatgaaaaagataatgaaccagaacccaagaga
aagaagaaatctgcacttttgttgcacagtgattcagaagacgattatgaagatgatgtt
cagtctgtagctatgtcgcaagcaatggataaaaaacgtaaatatagcgatagttatgat
aacattagcgtaaggagtggatccacattgaagtatcaagcaggagggtctggaatacat
cgaccattgaaaaaatcaagaacggaatatataccaggagcagaatataaagcatcaaag
gctggaggtgatgttaaaaggaaaggaaaaccagatccatatgcttatgtacctctgtca
agagcagcattaaacaaaagaaaaaagaagaagaatgcgagtaaatttcagaacattatt
aaaggagcgaagaaaggtgcgaaaattggaatgaagcaaaggaaaaactaa
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