Bombus terrestris (buff-tailed bumblebee): 100642865
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Entry
100642865 CDS
T04364
Name
(RefSeq) endoribonuclease Dcr-1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bter03036
]
100642865
Chromosome and associated proteins [BR:
bter03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100642865
microRNA pathway
RISC loading complex
100642865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
100642865
NCBI-ProteinID:
XP_020723074
UniProt:
A0A9B7CZ81
LinkDB
All DBs
Position
17:complement(11111686..11120216)
Genome browser
AA seq
1965 aa
AA seq
DB search
MAFPLNDQIYTKSFTPREYQVELFYAAKDRDIIVCLGKNYEQTFIVIKLIQEFATNNRRL
LSEGGRRSLFILTDEEKCTIKASYIQQLTDLKVLLCDTCSVTEFIENFETSHVLVTTGKT
CAQLLTDRKILPCQINLVIIDECHKSIDNNELKFILQTILACENVPRIIGLAVPLFNLTQ
EPGRLGLEIEKVENTFQCEVETASDILSILRDLSLNRYSPKPKEYVVEYAKNEKGKLHTT
IENYILHALEFLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLYILETLGPWCA
DRAALALLILTEKLKVKTPYERHYLLLNMVASVFTKIRALCDNTFEVLSEKERIYKYTTP
KVHRLLQILKTYTPYYNKDINNTDNKLKENISQKLSVNNREGFTRDRFVQSKKSDCNWKN
NEENCRKPPRAPRHIRGITDPDLLCGVIFVNKAFVAKVLFYLLNEISMHDEDLRFLSPLY
TIERNIEDISYSKDLEIEHRKQEEVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDF
PKTYQSYVQCKTRARATDALYVLLVPQEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEE
ENEADMYAAMIPHYKPLDGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMVV
DNKFMYTCSLRLPINSPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLPIGK
ENFKAKPEDAEVPALPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYLYH
INLVLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLS
KQTIVLNEMQVEKIAIFLNYTFTNVLRLQQYLMLFDPNASENSYMIVPVKLDEQSDVIVD
WNFLECIYKNRNAGPTKVPEEIRKNFKFDASKYHDAVIMPWYRSQDQPQYFYVAEICTNL
NPKSSFPGDDYSTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPT
SSEETKRAKRENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQV
ARMINLGQENLNMDFEWPPLDFGWSLAEVLKKSKESEKAKLAKNETIQQNSTIDTIDNKC
QNIPKDIIDSLHKSDKEDLNENNYEFQIKNDKIIEIEEQISNDENELEIGTWSSDMAMNS
LDFETNNLKSFPLNVTVLPNDFNWSDIRYGSPACESDFDGYESDDIYSDGFVDSSDESED
ENRGLRISYMGENIAEAVEDEKQMSKQETNKKILDLLETEKSLDDVLWSYTEEKENSSIT
KHRQAHYEFAKVREFEIMQNGSFISCDNEIAIKKKASCNLQCEENLPNYKHKDYVETVVE
KFTKKILNNNDTVQLIKKDSNSSKFTYHSDSNLFSFDFQPELENHAGPSPSLILQALTMS
NANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKM
LGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPALQAVNPSEITQL
VRETEQKLGVMKTELDRNETSLSNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYL
IACGSRGALLFMAWLGIHVLPTEEITIIQESEPRERVPGSTPYIKGTNEKGQTTWTQIRY
GKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKSIGYEFHDISYLLQAFTHASYQPNRLT
DCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALVNNTIFASLAVRCGFHKYF
RHLSPGLSIVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAI
YLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRV
RVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKLKKMQNYSRDKL
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccactgaacgatcagatttatacaaaatcttttacacctagagaataccag
gtagaattattttatgctgctaaagatagagacattattgtttgtttaggtaaaaattat
gaacaaacttttattgttataaaattaatccaagaatttgctacaaacaatagaagatta
ttaagtgaaggaggaagacgatcattgttcatattgactgatgaagaaaaatgtacaata
aaagcaagctacatacaacaactgacagatttaaaagtattattatgtgacacttgttca
gttacagaatttatagaaaactttgaaacttctcatgtactagttacaactggtaagaca
tgtgcacaattattgacagatagaaaaattttaccatgtcagataaatctagtcataatt
gatgagtgccataaatctatagacaataacgaactaaaatttattttacaaactattttg
gcatgtgagaatgttcctagaatcattggactagctgtaccattgtttaatttaacacaa
gagcctggaagattaggattggaaatagaaaaagtagaaaatacgtttcaatgtgaagtt
gaaacagctagtgatatattatctatattgcgtgatctttctttaaatagatatagccct
aagcctaaagaatatgtagtagaatatgctaaaaatgaaaaaggaaaattacatactact
atagaaaattatatattgcatgctcttgaatttttacgtgatcatcgtcatgatccaact
gagatttacaatgaggaattctatgaagacatccaaaaaataccagatcctacagagaaa
ccttttgagatgatgcaagactttttgtacatattagaaactcttggaccatggtgtgca
gatcgtgctgcattggctcttctaattttaacagaaaaattaaaagtaaagacaccttat
gaaagacattatctattattaaacatggtagcatctgttttcacaaaaatacgagcttta
tgtgataatacatttgaagttttatctgaaaaggaaagaatatataaatatactactcca
aaggttcatagattattgcaaattttaaaaacatatacaccatattataataaagatatt
aataacactgataataaactaaaagaaaatatttctcaaaagttatcagtaaataatagg
gaagggtttactagagatagatttgtgcaatctaaaaaatcagattgtaattggaaaaat
aatgaagaaaattgtagaaaaccacctagagcaccacgacacatacgtggtattacagat
cctgacttactttgtggagtaatttttgtaaataaggcatttgtggcaaaagtgttgttt
tatttgttgaatgaaatatctatgcatgatgaagacttacgtttcttgtcacctctttat
acgattgagaggaatattgaggatattagttattcaaaagatttagaaatagaacataga
aaacaggaagaagttttaaaaagatttaggatacatgaatgtaatttattaatttcgact
tcaattttagaagaaggtatagatatacccaaatgcaatttcgtaatgaggtacgatttt
ccaaaaacttatcagtcatatgtacaatgtaaaactcgtgcaagagctacagacgcatta
tatgtgttattagtaccacaagaaatgtcaaaggagtatatatggcagctagctcaatat
cattacatagaaaagactttgttagtaaaatgttctaataacgaaccgtctgaagaagaa
gaaaacgaagcagacatgtatgctgctatgataccacattataaaccgcttgatggagat
gatgcacctaaagttacttttaattctgcaatatcactagtaaacagatactgtgcgaaa
ttacctagtgatacttttacaaggttaactccagaatggtccattcaagaaatggttgtt
gataataaatttatgtacacatgttctttacgacttcctataaattccccagtaaaatat
gttgtactgtcatatcctatgcctaatagagctatggcaagacgaatggctgctttacag
ttatgcattgatttacacagaaaaaatgaaatagacgataatttgttacccattggaaag
gaaaattttaaagctaaaccagaggatgcagaagtacctgctctaccagatgaaagtaaa
gtggatttttctgaagctcgaccgggaacaaccaagcgcagacaatattattataaaaag
acagccgaggcattaacagattgtagaccaattattggagttccttcttatttatatcat
attaatctggttttgagttgtcctttacctgaagaacaaaatacaagaggtcgacgtata
tatcctcctgaggaatcagcgattggttttggtataataacattaaaagaaattcctaag
ttatgtccatttcctatttatactagatctggggaagttcatgtaaaattaaaacttagt
aaacagactatagttctaaatgaaatgcaagtagaaaaaattgctatttttcttaattat
acttttacaaatgtattaagattacaacaatatttgatgctttttgatcctaatgcttca
gaaaactcatatatgattgtacctgtgaaattagatgaacaatctgacgttattgtagat
tggaatttcttagaatgtatatataaaaatcgaaatgcagggccaactaaagttcccgaa
gaaattagaaaaaatttcaagtttgatgcatcaaaataccatgatgcagtaattatgcca
tggtatagaagtcaggatcaacctcagtacttttatgttgctgaaatttgtacaaattta
aatcccaaatcttcttttcctggtgatgattatagcacttttgaagaatattatcttaaa
aaatatgatatacagatacaaaatttagatcaacctttactagatgtggatcacacatca
gctagattgaattttttaacaccaaggtatgttaatcggaaaggtgttgctttaccaaca
agcagtgaggaaacaaaacgggcaaaacgggaaaatctggagcaaaaacaaattcttgtt
gctgaattatgcgcaattcatccttttccagcttcactttggagacaagcagtttgttta
ccttgtattttatatagaattaatgctctattacttgctaatcaaatacggtgtcaagtt
gcacgaatgataaatttaggacaggagaatttaaatatggattttgagtggccaccatta
gattttggttggagtttagcggaggttttaaagaaatctaaggaatctgaaaaagcaaag
ttagccaaaaatgaaactatccaacaaaattctacaattgatacaattgataataaatgt
caaaatatacctaaagatataatagacagtttacacaaatcagacaaagaagacttgaat
gaaaataattacgagtttcaaataaaaaatgataagataatcgaaatagaggaacaaatt
tcaaatgacgaaaatgaattagaaatcggtacttggtcaagcgacatggcaatgaattct
ctggattttgaaacaaataatttaaagtcatttcccttaaatgtaactgttttaccaaat
gattttaactggagtgatattcgatacggatcccctgcgtgtgaatcagatttcgacggt
tatgaatcagacgatatttatagcgatggatttgtcgatagttctgatgaaagtgaagat
gaaaacagagggttacgaatttcttacatgggagaaaatattgcagaagctgtagaagac
gagaaacagatgtctaagcaagagaccaataaaaaaattttggatttgttagaaactgag
aaaagtttggatgacgttttatggtcgtacacggaagagaaagagaattcttcaattacg
aagcatagacaagctcattatgaatttgctaaagtaagagaatttgaaataatgcaaaat
ggatcttttatatcctgtgataatgaaattgcaataaagaagaaagcttcatgtaattta
caatgtgaagaaaatttgccgaactataaacacaaagattatgtagaaactgtagtcgaa
aaattcactaaaaaaatattaaataacaatgatactgtacaactgataaaaaaggattct
aattcatcgaaatttacatatcattcagatagtaatctttttagctttgattttcaacca
gaactagaaaaccatgcgggcccaagtcctagtttaatcttacaagctttaactatgtcc
aatgcaaatgatggtattaacttagaacgtttagaaactattggtgattcttttttgaaa
tatgctataactacttatttatattgtacatatgataatatacatgaaggcaagcttagt
cacttaagatctaaacaggtcagtaatttaaatttatacagattagggagacaaaaaatg
ttaggtgagagcatgatagcaacaaaattcgaaccacatgacaattggttacctccttgc
tattatgtaccaaaggaacttgaacaagcattaattgaatctggtgtaccttctactttg
tggaatcaagccgacattccagctttgcaagccgtaaatccctctgaaataactcaatta
gttcgagaaacggaacaaaaattgggtgtcatgaaaactgaacttgatcggaatgagaca
tcactttcgaataatttagataacatgcgttgttttataccgtacaatttaattacgcaa
catagcattcccgataaaagtatcgcagattgcgtggaagcgttaattggagcttattta
attgcttgtggatctagaggtgcattacttttcatggcttggttagggattcatgtttta
cctacagaagagattactattatacaagaatcagaaccaagagaaagagttccaggtagt
accccttatataaaaggaacgaacgaaaagggacaaacaacatggacacagattcgttat
ggaaaattggaagaaccacaaaaccccttacttcgatacattcctgatccagaacaagaa
ttaaaaatgatgcttgatggttatgaagaattagagaaaagtataggatatgaatttcat
gacattagttatttattacaagcatttactcatgcatcatatcaacctaataggctgaca
gattgttaccaacgtttagagtttcttggagatgctgttttagattatttaataacaaga
catttatatgaagatgctcgtcaacattctccaggcgctttaacagatttacgatccgcc
ttagttaataatactatatttgcttctttagctgtaagatgtggatttcataaatatttt
cgacatctttctcctggtctaagtattgttataaatcgtttcgttaggattcaagaagaa
aatggacattctattagcgaagaatattatttaattggagaagaagaatgcgaagaagct
gaagatgtagaggtaccaaaagcattaggtgatgtttttgaatcactagctggtgcaatt
tatttagatagtggaatgtctttggatgcagtatggagcgtctattacgccattatgaaa
aatgaaattgaacaattcagcaccaatgttcctaaatctccaattcgtgaactattagaa
ttagagcctgaaacagcaaaatttggaaaaccagaaaaattggctgatggacgaagagtt
cgagttacagtggatgtttttggtaagggctcttttaaaggaattggcagaaattacaga
attgcaaaatgtactgcagcaaaatgtgctttaaaaaagctgaagaagatgcagaattat
tcaagagataaactatga
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integrated database retrieval system
