Bombus terrestris (buff-tailed bumblebee): 100643295
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Entry
100643295 CDS
T04364
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100643295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100643295
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100643295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
100643295
NCBI-ProteinID:
XP_003399941
UniProt:
A0A9B0C086
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Position
12:6196904..6202996
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AA seq
712 aa
AA seq
DB search
MTDDKTEFDWGNEKLQRAQKTVDESSYDLEAWSILIREAQNRPIVEVRPVFEKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIADKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTVGVLPRIPDPEEAIASLPRPDISQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPIADNGCDTKLFDLA
KSVHWIVDESNDGVSIGSKRRRTRLGDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgataaaacagaatttgattggggaaatgaaaaattacaacgtgctcaaaaa
acggtagatgaatcttcttatgatttggaagcatggagcatccttatcagagaagcgcaa
aacagacctattgtagaagtaaggccagtttttgaaaaacttgtgtccgtgtttccttct
gcaggccgatattggaaaatttatatagaacaagagatgaaaatgcgcaactttgaaaag
gtggaaaagcttttccaaaggtgccttatgaaaatcttaaatattgagttgtggaaactt
tacctttcttacgtgaaagaaacaaaagccagtcttgcaacatacaaggagaaaatggca
caagcatatgactttgcactggataaaattggtatggatatccattcctatagtatatgg
aatgattacgttacattccttaaaagtgtggaagctgttggttcatatgctgagaaccag
aaaattagtgcagtgaggaaggtatatcaacgaggtgtagttaatcctatgataaatatg
gagcaattatggaaagattatatggcttttgaacaaaatattaatccaataattgcggat
aaaatggctattgaacgttctagagactatatgaatgcaagacgagttgccaaagaatta
gaagctgtaacaagaggattgaatcgaagtgctcctagtgtacctccaactggtcatccg
gaagaagttaaacaggttgaattgtggaagaaatatattgcatgggaacgtagtaaccct
ttaagaactgaagatacttctttagttgcacgcagagtaatgtttgcaatagaacagtgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgcacactttttagaactt
agctcaaaaatattaacagagaaaggagatgtaaatgccgcaaagaatttaagcgatgaa
gcagcaacaatgtttgaaagagcaacaagtacattgttgtccaaaaatatgttattatac
tttgcgcatgcagattttgaagagggaagagtaaaatatgaaaaagttcatcaaatatat
caaaagttccttgatatacctgacattgaccccacactagcatatgtacaatacatgaaa
ttcgcaagacgcgctgaaggtataaaatcggctagaacggtttttaaaagagcgcgcgaa
gacccaagatgtaaacatcatgtatatgttgctgcagcattaatggaatattattgcaca
aaggataaaaatattgcttttcggatatttgaattaggtttaaagaaatttggggacaat
cctgactatatactttgttatattgactacctgtcacatttgaatgaggacaataataca
agagttttattcgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgat
atatggaatcgatttttagaatttgaatctaatattggagatctagcaagtattgtaaaa
gttgaaaaacgacgtagtgctgtattagaaaagatcaaagaattcgaaggtaaagaaaca
gcacaattagtagatagatataaattcttggatctatatccatgtactcctatggagtta
cggtccatcggatacatggaagtatccagcgttggaagaagtacagttggtgtattacca
cgaataccagatccagaggaagctatagcatcattgccaagacctgatatatcacaaatg
ataccttataaaccgaaagtaaatccattacctggagagcatccagtaccaggtggatct
tttccattgccaccagctgcagcacaactttgtaccatgcttcctccacctggatgcttc
agaggaccatttgtggctgttgatttactcatggatgttttcaatcgaattcagttacct
gaccatgctccattgccaatagcggataacggatgtgacacaaaattgtttgacctagcg
aaatccgtacattggatagttgacgaaagtaacgatggggttagtattggatctaaacgt
agaagaacgcgcttaggtgatgacagcgaagaagaagacttaccaccgccgcccgcaaat
gacatatatcgccaaagacaacaaaaacgagtcaagtaa
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