Bombus terrestris (buff-tailed bumblebee): 100643605
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Entry
100643605 CDS
T04364
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100643605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100643605
Spliceosome [BR:
bter03041
]
Complex C
Other components
Step II factors
100643605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD_LRWD1
PQQ_2
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
100643605
NCBI-ProteinID:
XP_003394770
UniProt:
A0A9B0BV30
LinkDB
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Position
4:complement(18135476..18137915)
Genome browser
AA seq
582 aa
AA seq
DB search
MLALKDYGSSDDNSEPENESEIKKREVNCIVDSTNVSAVNSISAGNLTASINMQICSAPE
VIPTGTELCMNHVDSTVKEIMHNPKYEELFAPDVGPENPFKTQQQRAVKNMLSGYVEKAH
ISEFQFENQRRTFASYGYALDPTVDGSADEGKTIIGAKDAAEESGGKTVFESTALRASDK
RKRHRNDDPADIEGFLGPWGGYVDEKRIIKPTEEEAAELEEILAKRNRRGKPTEEKPLEE
KTVLHIKDSVDYQGRSFLHAPQDVGVNLRSESPPDRCFLPKAQIHTWEGHTKGISQIRWF
PHTAHLLLSSSMDCRVKLWEVYKDRRCIRTYYGHRQAVRDISFDNDGKRFLSAGYDRYVK
LWDTETGACVSRFTSRKIPYCVKFNPDPDKQHLFVAGTSDKKIICWDIRSGEITQEYDRH
LGAVNTITFVDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTPSPNQKWLA
CQSMDNKIVIFSALNRFKMNRKKTFTGHMVAGYACGLDFSPDMSYLVSGDADGKCYIWDW
KTTKLYKKWKAHDGVCIDVLWHPHEPSRLATAGWDAKIKYWD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctttgaaagattatggtagtagtgatgataacagtgaacctgaaaatgagagt
gaaattaaaaagagggaggttaactgtattgttgattctaccaacgtttctgccgttaat
tctatttctgcaggaaatttgactgcatctataaatatgcaaatttgttctgcaccagaa
gtgataccaacgggaactgagttgtgtatgaatcatgttgattcaactgtgaaagaaata
atgcacaaccctaaatatgaagaactctttgcaccggatgttggtccagaaaatccattt
aaaacgcaacagcaacgtgctgtaaaaaatatgctttctggatatgtagagaaagctcat
ataagtgagtttcagtttgaaaatcaaagaagaacatttgccagttacggatatgcacta
gatccgactgtagatggtagtgcagacgagggtaaaacaattattggtgcaaaagatgca
gctgaagaatctggtggtaaaactgtatttgaaagtacagcattaagggcttctgacaaa
agaaaacgtcacagaaatgatgatcctgcagatattgaaggattcttgggtccatggggt
ggatatgtggatgaaaaacgaattatcaaaccaactgaggaagaagctgcagaattagaa
gaaatattagcgaaaagaaacagaaggggaaaaccaacagaggaaaaaccacttgaagaa
aaaacagtattacatattaaagatagtgtggattatcagggcagatcatttttacacgcg
ccacaggatgttggggtaaatttgaggtcagagtcaccacctgacagatgtttcttacca
aaagcacaaattcatacttgggagggacataccaaaggtatttcacagatcagatggttc
ccacatactgcgcatttgttactttctagtagtatggattgcagggtgaagttatgggaa
gtttataaagacagaagatgtatccgaacttattatggacatcgtcaagctgtaagagac
ataagctttgataatgatgggaaaagatttttgtctgctggatatgaccgttatgtaaaa
ttgtgggatacagaaactggtgcttgcgtaagtcgatttacgagcagaaaaattccatac
tgtgtgaaatttaatcctgatccagataagcaacatttgttcgtagcagggaccagtgac
aaaaagattatctgttgggatatacgttccggtgagataacacaagaatatgacagacat
ttgggagctgtaaacacgataacattcgtagatgaaaatcgaagatttgtaacgacttcg
gacgataaaagtctgagagtatgggaatgggatataccggtcgatatgaaatacatagct
gatccttcgatgcattctatgccagcagttacaccctctcctaatcaaaagtggctggcg
tgtcagagcatggataataaaattgttatattttctgcattaaacagatttaaaatgaat
cgtaagaaaacatttacgggtcacatggtcgctggctatgcgtgcggtttggatttttct
cctgacatgagttaccttgtatcgggagatgcggatggaaaatgttatatttgggattgg
aaaacgacaaaattgtataaaaaatggaaagcacatgatggtgtttgtatcgacgtatta
tggcatcctcatgaaccttcgagattagccacagctggttgggatgcaaaaataaaatat
tgggattaa
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