Bombus terrestris (buff-tailed bumblebee): 100643701
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Entry
100643701 CDS
T04364
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100643701
03015 mRNA surveillance pathway
100643701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100643701
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100643701
mRNA cycle factors
P-body specific factors
100643701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
100643701
NCBI-ProteinID:
XP_048265479
UniProt:
A0A9C6SB73
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Position
10:3983542..3987734
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AA seq
620 aa
AA seq
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MTMTEETQQSETAAQNEAQTSSPDVGKVKDSKKEKCRPMTKVVIRRLPPTMTQEQFLEQV
SPLPEHDYLYFVKADMSLGQYAFSRAYINFVEQQDIFMFREKFDNYVFVDSKGTEYPAVV
EFAPFQRLPKKRIGKKKDLKCGTIESDPYYISFLESLKNQEAESNISQPKTEYSYQPPDN
TPKKVTTTPLLEYVKQRKQEKQRLRDEKREERRRRDLERRRTKEDPIISKVLKNPDLDKE
MCKDNKENREEKDKLSPKDIKNRIKKEDKLRDKVPRDRDSKAITKGYRERIEDRNKDRDI
KHQRRHEDKKIYGRREERDGIKDDRRFDGKDDRKYDFKEDTKDSRERKIEEKRGKSYEKM
RQEKKRLAETKKQNVEFSVDTENSTKLRSEDEEFQKKEPSIDLYENIKENDEAMGDKEDA
KYNKGKEKQETNERKVLIEDPVHDFGTRDQKRTETTVESNKDIEKSKSNEDINKEINEDD
ESEEKKDSKVTKRRSSLESGGEGGTGDGNCLRRHKSLDGGDQNNLQKTENEDKEKDKKDP
RLERRIRNKDRPTMEIYRPGMGKFSKQRLEREKSNTNDERASLSQSPTPNPNSNNLCKSG
KPGTEVRSMTFKRSISRDLV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactgaggaaacacaacaatctgagacagccgcacaaaatgaggcacaaact
agttctccagatgttggaaaagttaaagatagtaaaaaagaaaaatgccgacctatgact
aaggtagtaatacggagattacctccaactatgacacaagaacaattcttagagcaagtt
tctccattgccagaacatgattatctttattttgtaaaagctgatatgtctttgggacaa
tatgctttttcccgtgcatatattaactttgttgagcaacaggatatttttatgttcaga
gagaaatttgacaattatgtatttgtcgactctaaaggaacagaatatccagcagtagta
gaatttgcacctttccaaaggttaccaaagaaaagaataggaaaaaagaaagatttgaaa
tgtggtacaatagagtcagatccatattatataagtttcttagaaagtcttaaaaatcaa
gaagctgaatctaatatatcacagccaaaaacagagtactcatatcaaccacctgataat
acaccaaaaaaagttacaactacacctctcttagaatatgtgaaacaacgtaagcaggag
aaacaacgtctcagagatgaaaaacgcgaagaaagacgacgaagagatctagaaaggagg
cggacaaaggaagatcctattatatctaaggtattgaaaaatccagatcttgataaagaa
atgtgtaaagataataaagaaaatagggaggaaaaggataaactttcacccaaagatata
aaaaatcgtattaagaaagaggataaattacgtgacaaggtaccgcgtgatcgagattcc
aaagcaataacaaagggatatagggaaagaatcgaagatagaaataaagatagagatata
aaacatcaaagacgacatgaagataaaaagatatatggaagacgtgaagaaagagatggt
ataaaagatgatagaagatttgatggaaaagatgatagaaaatatgattttaaagaagat
actaaagattctagggaacgaaagattgaggaaaaacgaggtaaaagttacgaaaaaatg
aggcaagaaaaaaaaaggcttgccgaaaccaaaaaacagaatgtagaatttagtgttgat
acagaaaatagtacgaaattaagaagtgaagatgaagaattccaaaagaaagaaccatca
attgatttgtatgaaaatattaaagaaaatgacgaagctatgggtgataaggaggatgct
aaatataataaaggaaaagagaaacaagaaactaacgaaagaaaggttctaatagaagat
cctgtgcatgattttgggacaagggatcagaaaaggacagaaacaactgttgaaagtaac
aaagacattgagaaatcaaaatccaatgaagatattaataaagaaattaatgaagatgat
gaatctgaagaaaagaaggattcaaaagtcacaaaaaggcggagttcacttgaaagtgga
ggggaaggtggtacaggagatggaaattgtttaaggaggcacaaatctttagatggaggc
gatcaaaataacttacaaaagactgaaaatgaagataaagaaaaagataaaaaggatcca
cgattagaacgtcgaattagaaacaaagatcgtcctaccatggagatctatcggcctgga
atgggaaaatttagcaaacaaagattagaacgagaaaaatctaatactaacgatgagaga
gcatcactttcgcaaagtcctactccaaaccccaattctaataatctttgtaaatcagga
aaacctggaactgaagtgcgatctatgacgtttaaacgtagcattagtcgtgatttggta
taa
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