Bombus terrestris (buff-tailed bumblebee): 100643706
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Entry
100643706 CDS
T04364
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100643706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100643706
Spliceosome [BR:
bter03041
]
Complex B
Other components
Prp19-related factors
100643706
Complex C
100643706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
100643706
NCBI-ProteinID:
XP_003399785
UniProt:
A0A9B0F4H6
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All DBs
Position
12:8668354..8669995
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AA seq
411 aa
AA seq
DB search
MATSKTTNMYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDSEIGKIDPTSPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYVGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMAAATATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcaaagacaacgaatatgtataataggcaaaattgggaagatgccgaattc
ccaatattatgtcaaacttgtttaggtgacaatccgtacattcgtatgacaaaagaaagg
tacggaaaagaatgcaaaatatgcatgcgtccatttacagtatttaggtggtgtcctggt
gcaagaatgcggttcaaaaagacagaagtttgtcagacttgtagtcgcttgaaaaatgtg
tgtcagacatgtttacttgatttagaatatggtttaccaattcaagtacgcgatgcagca
ctcaagatcaaagatgacttgcccagatcagatgtaaacaaggaatattatgtacaaaat
atagacagcgaaattggaaaaatagatcccacatcaccagcaggtgctgttggtaaatct
gcagctgctagtgatttgttgatgaagctggcaaggactagtccttattacaaaagaaac
aggccacatatttgttctttttgggttaaaggagagtgtaaaagaggagaagagtgtcca
tatcgtcatgagaaacctactgatcctgatgatccattagctgatcaaaatatcaaagat
cgttattacggagttaacgatcctgttgctgataaattaatgcgccgagctgcagctatg
cctaagttagatccaccagaggataaatccattacaactctctatgttggcaacttaggc
gatgttttaacagaaaaacaattacgcgatcatttttatcaatacggtgaaatacgctcc
gttactatggttcctcgtcaacagtgtgctttcattcagtacacacagagaagtgctgca
gaagcagcagcagaaagaacatttaacaaactaatattaggagggcgaagattaacaatt
aagtggggacgttcacaaggaaggcaaactgtatccgcagcagaagcaactagagaaatc
ttggagcctgtgccaggtttaccaggtgctctaccacctccaccagaaagcatgggaaat
aattttttcaatctacaaactactcctggcatgatgccaccaatgatgattccacctcca
ccagttgctccccaatttatgttcccacctcaaatggcagctgccactgcaacacctatt
tttccacctggaacaactccaatacattatccaagtcaagatccatcaagaatgggtgcg
tctcaaggcataggaaaaccttggcccgaagaatag
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