Bombus terrestris (buff-tailed bumblebee): 100643803
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Entry
100643803 CDS
T04364
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03015
mRNA surveillance pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100643803
09122 Translation
03013 Nucleocytoplasmic transport
100643803
03015 mRNA surveillance pathway
100643803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100643803
03041 Spliceosome [BR:
bter03041
]
100643803
03009 Ribosome biogenesis [BR:
bter03009
]
100643803
03012 Translation factors [BR:
bter03012
]
100643803
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100643803
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100643803
mRNA cycle factors
Stress granule specific factors
100643803
Spliceosome [BR:
bter03041
]
Complex C
Other components
EJC/TREX
100643803
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
90S particles
Helicases
100643803
Translation factors [BR:
bter03012
]
Eukaryotic type
Initiation factors
eIF-4
100643803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
100643803
NCBI-ProteinID:
XP_012164369
UniProt:
A0A9B2MNL0
LinkDB
All DBs
Position
5:complement(1478838..1481505)
Genome browser
AA seq
403 aa
AA seq
DB search
MAEVKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtaaaatcacgtcgcgtcgcacaaaccgaagatctatcaaacgttgagttt
gaaacaagcgaagatgtggaggttattccaacgttcgataatatgggacttagagatgag
ttattacgtggaatctacgcttacggtttcgaaaagccgtccgcgattcaacagcgatct
attaaaccgataatgaaaggacgagatgtgattgcacaagcccaatctggtacaggaaaa
acggcaacattttcaattgctatactacaatcattggacacacaagttagagaaacacaa
gtattggtgttatcacctacaagagaattagcaactcagatacagaaagttattctggct
ttaggggattttatgaatgttcaatgtcatgcttgtataggtggtacaaatcttggagaa
gatattagaaaattagattatggacagcatgttgtatcaggcacacctggcagagtattt
gatatgataaaaaggagagttcttagaactagagcaataaaaatgttagttcttgatgaa
tctgatgaaatgttaaataagggtttcaaggagcagatttatgatgtatatagatatttg
ccacctgcaacacaagttgtgttggtatctgcaacattgccacatgaaattcttgaaatg
accagtaaatttatgacagatcctattcgtattcttgtaaaacgtgatgaactgacactg
gaggggataaaacagttttttgtcgctgttgaaagagaagaatggaaatttgacacatta
tgtgatttatatgatacactgacaataacacaagcagtaatcttttgtaatactaaacgt
aaagtagattggttaactgaaaagatgagggaggctaatttcacagtttgttccatgcat
ggtgatatgccacagaaggaaagagataacataatgaaagaatttcgatctggtcaaagt
cgtgttttaattactactgatgtgtgggcacgaggaatagatgtccagcaggtatctctt
gtgatcaattatgatttgcccaacaatcgtgagttatatattcatagaataggaagatcg
ggacgtttcggaagaaaaggtgtttccatcaatttcgtaaaaaccgacgacataaggatt
cttcgagatattgaacaatattattcaacacaaattgatgagatgcctatgaatgtagca
gacttaatataa
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