Bombus terrestris (buff-tailed bumblebee): 100644103
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Entry
100644103 CDS
T04364
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04140
Autophagy - animal
bter04142
Lysosome biogenesis
bter04145
Phagocytosis
bter04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100644103
04142 Lysosome biogenesis
100644103
04140 Autophagy - animal
100644103
04148 Efferocytosis
100644103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bter04131
]
100644103
Membrane trafficking [BR:
bter04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100644103
Hops complex
100644103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3H2C3
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf_RING_Vps8_fungal
COMP
zf-RING_Vps41
zf-RING_16
Occludin_ELL
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100644103
NCBI-ProteinID:
XP_012171888
UniProt:
A0A9B2JNC6
LinkDB
All DBs
Position
14
Genome browser
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYTPPIRPDISTAGFIQMKFLDDGPIFIKQKVNFLPPDKILHL
VVNNNIIVIAMANNLLLRIDMKHPDSPEEIDISKYAMNMEMSRMFLDPLGNHLLISLVPK
SQDPPNPPPELFYLHRKTTKLKQAGKFKGHEITAIGWNFSNSSETTTGPILLGTSKGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKDSKPPITGLEFHKIPN
TDKYVIIVTTLMRIYQYIGTVQNPEEKPLLQQIFNKYLNVQESFNEVINNLPYSKIQFYY
PSLGILPKSFGWLTEPGIFYAQIDPKIDPKSVLTNQQMLICPEASLMGINTSQTSTPPLS
FVLTEFHALLLYTDRVKGMSLLNQDLIFEDIYNDAVGGLLNITKDYATRSIWAYSERAVF
KYKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYA
DTHSSFEVISLKFLQEWQIDALKTFLKKKLEGLKTQDKTQITMIVVWVIELFMNQMGVLR
SNNTSYLHDPQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLDALEVLKSQNNKELFYQFAGILLQELPRPAMTALISQGSLLKPS
KLLPALVSCNSDEKHAKEVIRYLEFCVYKQSCQEQAIHNFLLSLYARYKRDEVMRYISSQ
GQDINMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTINVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDIVRIEDILPFFSDFVTIDHFKDAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFINTKDTCNTCGVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNKPEDTRSVRSVSLSTKDQ
IKADIDDLIASECLYCGELMIESIDKPFIEEEDYERVMKEWI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcatctcaaagatcaaaacaagtatataca
ccaccaattcgtccagatattagtactgctggatttatccaaatgaaatttctagatgat
ggcccaatttttattaaacaaaaagttaattttttaccaccggacaaaattttacatctt
gttgttaacaataatatcattgttattgctatggctaataatctcctcttacgtattgac
atgaaacatccagattcacctgaagagattgatatatctaaatatgcaatgaatatggaa
atgtcaagaatgtttcttgatcctttaggtaatcacttgttgatatctctagttccaaaa
tctcaagatcctcctaaccctccccctgaattattttatctacacagaaaaacaacaaaa
ttaaagcaggcaggtaaattcaaaggacatgagattactgccattggatggaacttttca
aattcttccgaaactactacaggtccaattctcttaggaacttcaaaaggcctcattttt
gaaacagaaattggtttagatggtgataaaatatttaatacaagcctggaacaatattgg
cgtcagcttcctaactatttacctctttatggtgctaaagaggtagaaggattggtattt
gatatagggaaagatagtaaaccaccaattactggtttggagtttcataaaataccgaat
actgacaaatatgtgattattgttactactcttatgcgaatttatcaatatattggaaca
gtacaaaatccagaagaaaaacctttattacaacaaatttttaacaaatatttaaatgtg
caagagagcttcaacgaagtaataaataatttgccttattctaaaattcaattttattat
ccttcacttggtattttaccaaaatcgtttggttggttaactgaacctggtatattttat
gctcagattgatccaaaaatagatccaaaaagtgtgttaacaaatcaacaaatgttaatt
tgtcctgaggcaagtctaatggggatcaatacctcacaaacaagtactccaccattatct
tttgttttaacagaatttcatgccttattactttatacagaccgtgtaaaaggcatgtcg
cttttgaatcaggatttgatattcgaagacatttataatgatgcagtgggaggattactt
aatattactaaagattatgcaacacgttccatatgggcttatagtgaaagagcagtattt
aaatataaagttaataaagaagatagaaatgtttggcagatctacgttgataaaggtgaa
tttgaacttgcaaaacaatattgtaaagataatccagcacatatagatcaagtgcttgta
aagcaagcagaaatgctttttaagaataaggaatatgaaaaaagtgctctcatttatgca
gatactcattcgtcatttgaagtaatttccttaaaatttctacaagaatggcaaatagac
gctttaaagacatttcttaaaaagaaacttgaaggattaaaaacacaagataaaacgcaa
ataaccatgattgttgtatgggtaattgaactatttatgaatcaaatgggtgtattacgg
agtaacaatacatcatatttacatgatccacaatatttagaattacaaaaacaatttgat
agttttcttgcaataccaaaagttgaggaatgtataaaaagaaatcgtagcactatatat
gatttaatggcaagtcatggtgataaagacaatcttattcgtttaactattatgcactgc
aactatgaagaagtgatacgtcagcatttatataaaaataattatttagatgctcttgaa
gttctgaaaagccaaaataataaagagctattttatcagtttgctggtattcttttacaa
gaattaccacgccctgcaatgactgctctaatatcacaaggatctttattaaagccatct
aagcttctaccagctttagtatcttgtaatagtgatgaaaaacatgcaaaagaagtaatc
agatatttggaattttgcgtttataaacaaagttgtcaagaacaggcaattcataatttt
ctattatctttatatgctcgttataaacgagacgaagtaatgcgttatattagctctcaa
ggtcaagatataaatatggtacattatgatgtgcattatgcattacgattgtgccaagag
gttggcttaacagaagcttgtgtacagttgtctgctttgcttgggttgtggacaacagca
gttgatttagctttaacaattaatgttgatcttgctaaacaaatagctgctatgccctct
gatcatgatgatgaattaaggaaaaagttatggttgaaaattgctgaacacgtagttcga
gaaaaagatgacatacaacaagcaatggaatttttgcagcattgcgatatagtcagaata
gaagatatattacctttcttttcagattttgttactatagatcacttcaaggatgctatt
tgcaattcattgcaggaatataatcaacatattcaagatttaaaggaagaaatgcaagaa
gcaacaaaagcagcagaacttattaggaaagatatacaagagtttagaacgaggtgcaca
tttataaatacaaaagatacatgcaatacttgtggtgttcaattactactacgacctttt
tatgtatttccatgtggacacagatttcatagtgattgccttgtagctgcattaacacct
atgttgtcaatggatcagagaacaaagctagctgatcttcaaagacaactcactgctctt
tcaaataaacctgaagatactagatcagtcagatctgtatctttatctacaaaagatcaa
atcaaggctgacattgatgacttaatagcatctgaatgtttatattgtggagaactaatg
atagagtctatagataaaccatttattgaagaagaggactatgagagagtgatgaaagaa
tggatatga
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