Bombus terrestris (buff-tailed bumblebee): 100644273
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Entry
100644273 CDS
T04364
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bter03009
]
100644273
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
90S particles
Other 90S particles
100644273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
HAT_Syf1_CNRKL1_C
S1_RRP5
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
OB_RRP5_4th
TPR_19
Spt6_S1
UTP6_C
TPR_2
TPR_15
S1_2
ARM_TT21_N
ARM_TT21_5th
TPR_6
TPR_12
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
100644273
NCBI-ProteinID:
XP_012173048
UniProt:
A0A9B2JPL2
LinkDB
All DBs
Position
16:complement(5493533..5498318)
Genome browser
AA seq
1390 aa
AA seq
DB search
MTLKNFPRGGKEIQKRKPSDLLFAKYEKIGKRNREKQKAKKQEKEPNFVPNTAERLSYAT
ISEGLVVLGCIYEVTNYDLLISLPGGLIGRAQITDISECYTNLLQSLVKSQDSQTNEFKS
LPELYTCGDYVVCYVKAIQSQERLQILISLEPNLINQSLDVNYLDSGSKIVCTISSIEDH
GYVVDTGLINVRAFIPTKESGNEKCLFPGKQLLCYVKEVKTNENTSTITLTLKQKLVKAI
CETEIKSLDSLMPGTKFNLSIKKVLSNGLCVSLDENNVGFINQTYLDEPLSKYSNNLKIT
GTLLYILPTIKFAYFSSTIDKNRDNTIKPGDVVKEATVLFRESGGIVLQLAKSGIRGFVS
FKRTSVEYDTIIEKFAPGTTHKCRILSYSWLDGIYICTMQRSLLEQKYFSLSDFKPGDVV
NVKITNIDKVNGFVNVQYGKFNGQIAPDHISDEGLSALKKLKVDKEVEARVLFVHIGRKK
VYLTLKRSLITSDLPILANIQDAKTDSKHHATIIQIHKHGILVKFFGDVKGWIPHTALDT
ETFNINWNYSIGQTILVKIQTVNTDSGEITLSVANQDIQDEKATFHIGEEVAGTIIESST
QGLYLKISKNEGQTVSTGFLPAGHMSPCMEIAALLASKYVPGDTLSALVFATVPSLILTR
TFVTQGRYRNFEKLKIGDCIPCTIKDMEPDGIRLILPVTECAPFGYVSYSNVSNFNLLHT
NQILMAKIYSINKKKQQLGLTLSLKKIYDDLSDPKSRMVAALDTLILYFNKLVELSRSSY
YKNRPIASVKLGQRVTGKIEKITADGLVVQLQNNLLGIVSKDHYSENKKIGDKISGTIIW
KNYVHELVELTTLSSIMHKISAKQDKQIQFPDGKLLRGRILMVTNWFILIFLQGIGKGTL
AAIPVRRHINDLQPDLTPYTVHSKIKCYALLNSEESDIMPLCIIKSAFEKKYCVREKSGD
NNNLKRKKQNQENVVLTKKIKIEKLQEVPKMESKEKRNREKPENDLEKEYSKTMCDEQTG
EERIKLEDIKPSKKNLRYALKNVNNDTDNEQRSRTSACGFFWDDNPDLTLLQDKDSSSDS
EDEIEEKPKLKNKKLSAAERREQERQKEHEIRQREEALANNLLPNSVDQFDRLVLASPDS
SIVWLQYMAYHLQTTEIEKARAVARRAVKTISFREENEKLNVWNAWLNLESKYGIPESLN
DVFQEAVRSNDSLKIYNHMLTVHVEAGRQIELEKTINTMIGKFKHIPEIWFNCGEALIKM
GLRDKSRHIMQRALQSLPASEHVNLMARFAIMENKFGDKERAQTLFEQILSSYPKRVDIW
SCYIDSLVKSNDIDIARKVLERAVAQTLPPRKMKILFKKFINFEEQHGTQEDVIRVQQMA
VEYVEKQCTK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgaaaaactttccaagaggtggaaaagaaatacaaaaaagaaaaccgtcagat
ttgttatttgccaaatatgagaaaattggtaaaaggaatcgtgagaaacagaaagcaaag
aaacaagaaaaggaaccaaattttgttcccaacactgcagaacgattatcctatgcaaca
atatctgaaggattagtggtattaggatgtatttatgaagtgacaaactacgatttgctg
atatctttgccaggcggcttaataggtcgtgcccaaattacagatatcagtgaatgttac
acaaatttgttgcaaagtttggtcaaatcacaagattctcagacaaacgaatttaagtcc
cttcctgagttatatacctgtggagattatgtcgtatgttatgtaaaagctatacaatcg
caagagagattgcaaattttgatatctcttgagcccaatctgataaatcaaagtttagat
gttaattatttagatagtggctcaaaaatagtatgtactattagtagtatagaagatcat
ggttatgtggtagatacaggtttaataaacgtaagagcgtttattcctactaaggaaagt
ggcaatgaaaaatgtttgtttccaggtaaacagcttctatgctatgttaaagaagtcaaa
actaatgagaatacttcaacgattacattaactttgaaacagaagcttgttaaggctatt
tgtgaaacagaaattaaatcattggacagcttgatgccaggcacaaaatttaatctttcc
ataaagaaagttttgtctaatggcttatgtgtttcattagatgaaaacaatgtaggattc
ataaatcaaacatatttagatgagcccttatctaaatactcaaataatctgaaaattact
gggacattattatatattttgccaaccatcaaatttgcatacttcagctcgacgatagat
aaaaatagagacaatactattaaacctggagatgttgtaaaagaagctactgttctattc
agagaatctggtggaatagtactacaattagctaagagtggaatacggggattcgtttcc
tttaaaagaacaagtgttgaatatgatacaatcattgaaaaatttgcacctggtaccaca
cataaatgcagaatattatcatacagctggttagatggaatttatatctgtaccatgcag
cgttcgctgttggagcagaagtacttttcattgtctgattttaaacctggcgacgtggta
aatgtaaagattacaaatatcgataaagtgaatggttttgttaatgtacaatatggtaaa
tttaatgggcaaattgcaccagatcatatatctgacgaaggtttaagtgctttaaagaag
ctgaaggtcgacaaagaagtagaagcaagagtcttgttcgttcatataggccgaaaaaaa
gtatatctcactttgaagagatctttaataacgagtgacttgcccattttagcaaacata
caagacgcgaaaactgactcaaaacaccacgcaactatcattcaaatacataagcacgga
atattggtaaagttttttggggatgttaaaggttggattccacatactgctctcgacaca
gaaacatttaacataaattggaactattcaatcggacaaacaattttagtaaaaattcaa
acagtgaacacagattcgggagaaataacactaagtgtggctaatcaggacatacaagat
gaaaaagcaacattccatattggtgaagaagtagcaggcacaataatagaatcatccact
cagggattatatttaaaaatcagtaaaaatgaaggacaaactgttagtacaggattttta
ccagctggtcacatgtcaccttgtatggagatagcagctctactagcatcaaaatatgtt
cctggtgatacactttcagctcttgtatttgccacagtacctagtttaattttaactagg
actttcgtaactcaaggaagatacaggaattttgaaaaactgaaaataggagactgtata
ccttgtacgatcaaagatatggagccagatggtataagactaattttaccagttacagaa
tgcgcgccatttggatatgtgtcctatagtaacgttagtaattttaatctactgcataca
aaccaaattttaatggcaaaaatatattctattaacaagaaaaaacaacaattaggacta
acattgtcgctaaagaaaatatacgatgatctatctgatcctaaaagtagaatggtggca
gcattggatacattgattctgtattttaataaattagtagaactttcaagaagttcatat
tacaaaaacagaccaattgcatctgtaaaattaggacagagagttactggaaagattgaa
aaaattacggctgatggtttggttgttcaattgcagaataacttgctaggtatagtgtct
aaggatcattactctgagaataaaaaaataggggacaaaatttctggaacgattatatgg
aaaaattacgtacacgagcttgtcgaattgaccacgttatcgtcaataatgcataaaata
agtgccaaacaagataagcaaatacaattccctgatggcaaattgctacgtggtagaatt
ttaatggtgacaaattggtttatcttgatattccttcaaggtattggtaaaggaacttta
gctgcgatacctgtacgtcgtcacataaatgatttacagccagatctaacaccttatact
gttcattctaaaattaaatgttacgccttattaaattccgaagaatccgatattatgcct
ctctgcatcataaaatctgcatttgaaaagaagtattgtgtgagagagaaatcgggtgat
aataataacttaaaaagaaagaaacaaaatcaagagaacgtagtactcaccaaaaaaata
aaaattgaaaagttacaagaagtaccaaagatggaaagcaaagagaaacgaaacagagaa
aaaccagagaatgatttagaaaaggaatattcaaagacaatgtgtgatgaacaaacagga
gaagaaaggattaaactggaagatatcaaaccttccaaaaaaaatttgagatacgcactt
aaaaatgttaataatgatacggataacgagcagaggtcaaggacatctgcgtgtggattt
ttctgggatgacaaccctgatttaactctccttcaagataaagactcatctagcgatagt
gaagatgaaatagaggaaaaaccaaagctgaaaaataagaaattaagcgccgctgaacgt
cgagaacaagaaagacagaaggaacatgaaattcgtcaaagagaagaagcgctcgccaat
aacctattaccaaattctgtagatcaatttgacagattagttttagctagtccagacagt
tcaatagtatggttacagtatatggcataccatttacagacgacagaaatcgagaaagca
agagcagttgcgagaagagcggtgaaaacaattagtttcagggaagagaatgaaaaatta
aacgtttggaatgcttggttgaatttagagtctaaatatggaattcctgaatcattgaat
gatgtttttcaagaggcagtaaggtctaacgattcactaaaaatatacaatcacatgttg
actgttcatgtcgaggctggtaggcagatcgaactagagaaaacaattaatacaatgatt
ggaaagtttaaacatattcccgaaatatggtttaattgtggagaagctttgataaaaatg
ggtttaagagacaaatcaagacatattatgcagagagcattgcaatctttgccagcatct
gaacatgtaaatctaatggcaaggtttgcgattatggagaacaaatttggggataaagag
agagcacaaactctgtttgagcaaattctaagttcctatccgaaacgggtggatatatgg
tcttgttatattgattccctagttaaatctaatgatattgatatagcaaggaaagttcta
gagagagcagttgctcagacattaccacctagaaagatgaagatcctgtttaaaaagttt
atcaattttgaagaacagcatggtactcaggaagacgtgattcgtgttcaacaaatggct
gtagaatatgtagagaagcagtgtacaaaatga
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integrated database retrieval system
