KEGG   Bombus terrestris (buff-tailed bumblebee): 100644493
Entry
100644493         CDS       T04364                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100644493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bter03041]
    100644493
Spliceosome [BR:bter03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100644493
 Complex C
   U5 SnRNP specific factors
    100644493
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR41 PAC11 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C CFAP251_N ANAPC4_WD40 NBCH_WD40 Beta-prop_SPT8 eIF2A Beta-prop_DCAF4 ASA1 Beta-prop_RIG_2nd Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR19_1st TRM82_WD Beta-prop_VPS8 Tricorn_2nd Beta-prop_RIG_1st WD_LRWD1 PD40 Nucleoporin_N RELCH_LH
Other DBs
NCBI-GeneID: 100644493
NCBI-ProteinID: XP_003399310
UniProt: A0A9B0C113
LinkDB
Position
11:17582497..17584466
AA seq 351 aa
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQNGPPRTSSLFAPIMLLEGHQGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVLTGHSGAIMELHFSPDGNHLYTAST
DMTLGLWDITAGTRIKKLKGHTSFVNSVSGARRGLTQLCSGSDDSTIRVWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNSILYRLKGHSDTITGLSLSPDGSY
ILSNAVDNTLRIWDVRPFAPYERCVKIISGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIEAAQ
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgccaattttggataaacgtaaaggagatgatatcttagcattagttcctgcctcaaaa
cgtaccaaaaatgaggtagtctttagtagtagagaaaaagcagttgtacaaaatggtcca
cctagaacatcttctctatttgcacctattatgctcctcgaaggacatcaaggagatata
ttttctcttgaatttcatccagagggtcaatatcttgcttccacaggctttgatagacaa
atttttatttggaacgtctatggagaatgtgaaaatatttctgtactaactggacatagt
ggagcgattatggaattacactttagtcctgatggtaatcatttatatacagctagtaca
gacatgacattaggtttatgggacataactgctggaactagaataaaaaaactcaaaggt
catacttcctttgtaaactctgtgtctggagcaaggagaggccttacacaactttgttca
ggtagcgatgatagcacaatacgtgtttgggatcccagaaaaagaggacagtgttatacc
ctaaataatacatatcaggttactgctgtaacatttaatgatacagcggaacaagtaata
agtggaggaatagataatgatataaaagtatgggatttaagaaaaaattctattctttat
agactaaaaggacattctgatactataactggattaagtcttagtccggatggttcttat
atattatcaaatgctgtggataacacattaagaatttgggatgtaagaccatttgctcct
tacgaacgttgtgtaaaaattatttctggacatcagcataattttgaaaagaatcttctg
agatgtgcatggtctccagatggtagtaaagtatcagctggatcatcagatagatttcat
tatatttgggatactacaagtcgtaggatattatacaaattacctggtcataatggttct
gtcaatgatattgactttcatccaaaagaaccaattgtttgctctgggtccagtgataaa
caaatatatctgggagaaattgaagctgcacaataa

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