Bombus terrestris (buff-tailed bumblebee): 100644511
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Entry
100644511 CDS
T04364
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100644511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bter03009
]
100644511
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
Pre-60S particles
RNases
100644511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Malic_M
Motif
Other DBs
NCBI-GeneID:
100644511
NCBI-ProteinID:
XP_020723070
UniProt:
A0A9B7I1C1
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All DBs
Position
2:8839182..8845915
Genome browser
AA seq
1231 aa
AA seq
DB search
MLPSTGYFKAINCPFYENGACDRPYCHFKHSKREDVGVTTEATETVENHSAGQAEDSKAA
TMVTSDSGVLQQLVTEAVKKVLANRSVTDVDNKLSCQNVVSQVVEELKPTLTTGSSGTVN
NVKATVVEERTNTPAPVNMQPCVYNPTPIAELKKRHIPIVSYMPTRKNTVAVKRKSSPDE
TKPWLNIDNESAEPQSVEIKYKPTVIITPEARDTMQSYIPTCKSDSASLNSCKDGSPNEY
LLKLRETYYPKSKKKREEYVPKKVKTRLKTGDELNESALDHIETDLNMMDEVLTCSKSTS
DVQSSKISPDTSIDIEPKFSEDEEENSNDCDNTDDHDDTNKNNTSHIDFKTLEQNESYPD
IKKSDHVNNLQDTYFPKIIDSTDRTINKENHNEKILTCSNTVKQETLPSDESSKPSQCEK
GNVSEVDSNKSTVKNVKEYKSKDKDKGNNQRDHSTSHKRYKEKHESSKRSHSSSHNKSKN
KNHLSHKSKESKDKNRDKDRSKYKHQEKDKAQDKDESKHKSKSDRKDNHRSGKRHGHSKS
SSKEHTKNKSDRSSKHLKMHRSLDDTINEKYVKSKEKRNLTERFGNSLESIRLNSMNDND
EENDDHHSSIIGNDIDVTFSMSDSDHDVQEECLKIFQEYQVPEQSRVAEPLKVRSSALDE
KEKEQVEEIGKKRVAHPSAAACVIRQIGVNQQARKFVNPQQKMYERWRLMRDAVAEKTIS
ASSSAPKDVRRNCTEAIGTASNSELKLTGNGRVRIAHVPYAKSLALEKRKVTENVGKSVE
PKAADNYKTAAQTAKSGVRIAHVPQMVPQLIRPEPLQVTTQKFPLNVRQYYVNMMQDVCV
LIYTSAEDAAQRAIKEEYACHERCKALAVYKSSCMLATHRLRKEADQNSSVDNNAIVIPG
SSTVSHETVLAGKTKGSWSVLKTKRSVTQFKGAALYGMLKKWIMTEQQLQSNGFPRPYPD
GQKGRAKVYVTNTRNQSVLSKVPNERICSRCGQTYMIDKRGFALRSQNCIYHWGRKFTIR
GESKYSCCQQYGSATGCCDAKTHVWDYTDYENLRGYVRTLPKDTPVEEQGVYALDCEMCY
TTQGLELTRITVIDDDCSVVYETLVNPQNPIVDYNTRFSGITEENMKDVTTTLLDVQATL
LTMFSDKTILVGHSLESDFKALRLLHDTVVDTSVMFPHKNGYPQKRALKNLCSEYLRKII
QNDVGGHDSKEDAVACMELILWKAKEEAKLQ
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaagctataaactgtccattttatgaaaatggagcg
tgcgatagaccttactgtcatttcaaacattcgaaacgagaagatgttggagttaccaca
gaggctacagagacagtggaaaaccattctgcgggtcaggctgaagactctaaagctgct
acaatggtaacatctgattcaggcgttttacaacaattagtaacagaagctgtcaaaaaa
gttctagctaatcgaagtgtcacagatgtagataataaattgtcttgtcagaatgttgtt
tctcaggtagttgaagaattaaaaccaacattaaccactggatcatctggtacagtaaac
aatgttaaggccactgtggtagaagaaagaacaaatacaccagcaccagttaatatgcaa
ccatgcgtttataatccaacaccaattgcagaactaaagaaacgtcacataccgatagta
tcctatatgccaactaggaaaaatacagtagctgtgaaacgtaaatcttctccggatgaa
actaaaccttggttaaatatagacaatgaatctgcagaacctcaaagtgttgaaattaaa
tacaaacctactgtgataatcacacctgaagctcgggatactatgcagagttatatacct
acatgcaaatcggactcagcttcactaaattcatgtaaggatggtagtccaaatgaatat
ttacttaaactcagggagacctattatccaaagagtaaaaagaaaagggaagaatatgtt
ccaaaaaaagtgaaaactcgactaaaaacaggtgacgaattaaatgaatctgcattagat
catattgaaacagatctcaatatgatggatgaagtactcacatgctctaaatcaacttct
gatgtacagtctagtaaaatatctccagatacttctatagatatcgaaccaaaattttct
gaagatgaagaagagaatagtaatgattgcgataatactgacgatcatgatgacacaaat
aaaaataatacttcacacattgattttaagactttagaacaaaatgaatcttatcctgat
ataaaaaaatctgaccatgtgaacaatttacaggatacgtattttccaaagataatagat
agcactgatagaactattaacaaagaaaatcataatgaaaaaatattgacatgtagcaat
actgtgaaacaagaaacactgcctagtgatgagagttctaaaccctcacaatgtgaaaaa
ggaaatgtatcagaggtagattcgaataaaagtacggttaaaaatgtaaaggaatataaa
agcaaggataaggataaaggtaacaatcaaagagatcacagtacctctcataaaaggtat
aaagagaagcatgagtcaagtaaaaggtcgcattccagttcgcataataaaagtaaaaat
aaaaatcatttaagtcacaagagcaaggaatcaaaagataagaatcgtgataaggatagg
agtaaatacaaacatcaggaaaaggacaaggcccaagataaagatgagagtaaacacaaa
tctaagagcgatagaaaggataatcatagatctgggaaacgtcatgggcattccaagagt
tcttcaaaagagcacactaagaataaaagtgatagaagtagcaaacatttgaaaatgcat
cgtagtttggatgatacaataaacgaaaaatatgtgaagagtaaggaaaaaagaaattta
accgagagattcggaaattctttagaaagcattcgtctgaattccatgaatgacaatgat
gaagagaatgatgatcatcatagtagtatcatcggtaatgatattgatgtaactttcagc
atgtctgattcagaccatgatgtacaagaagagtgtttaaagatatttcaggaataccaa
gtaccagaacaatcaagggtagcagaaccattgaaagtcagatcatctgcattggacgaa
aaagaaaaggaacaggtagaagagattggcaagaaaagagtagcacatccttcagcagct
gcatgtgttatcaggcaaattggagttaatcaacaggcgagaaaatttgtaaatccacaa
cagaaaatgtacgaaaggtggcgtctgatgcgcgatgctgtagcagaaaaaacaatttct
gcaagtagtagtgcccccaaggatgtacgtcgtaattgtaccgaagcgataggtacagcg
agtaacagcgaattgaagttaactgggaatggtcgtgtcaggattgcacatgtaccgtat
gctaaatccttagcactagaaaaaagaaaggtaacagaaaatgtaggaaagtcagtggag
ccgaaagccgcagataattataaaacagctgcacaaacggcgaagagtggtgtacgcata
gctcatgttccacaaatggttcctcagttaattcgtcctgaaccattacaagtaaccacg
cagaaatttcctttaaacgttcgtcagtattatgtgaatatgatgcaagacgtatgtgta
ttaatttatacaagtgccgaggacgcagcacaacgtgcgattaaagaagaatatgcttgt
cacgaaagatgcaaagcactagccgtttacaaaagttcctgcatgcttgctacgcataga
ttgagaaaagaagctgatcaaaattcatctgtggataataatgcaatagtaattccaggt
agtagtacagtttctcatgaaacagtgctggctgggaaaactaaaggttcgtggagtgtt
cttaaaacaaaaagatctgttacgcaatttaaaggggcagctttatatggtatgctaaaa
aaatggataatgacggagcaacaacttcaaagtaacgggtttcctcgtccatatccagat
ggtcagaagggtcgtgccaaagtctatgtaactaacacacgaaatcaaagtgttctgtca
aaagtgcctaacgaaagaatatgtagtcgatgtggtcaaacctatatgattgataaacga
ggatttgctttgcgatcacagaactgtatatatcattggggcagaaagttcacaatcaga
ggtgaaagcaaatatagttgctgtcaacaatatggttctgcaactggttgttgtgacgcg
aagacgcacgtttgggattatacagactacgaaaaccttcgtggttacgtgagaacttta
ccgaaagatacgccggtagaggaacaaggagtatatgcactcgattgtgaaatgtgttat
acaactcaaggattggaactaaccaggataacagttattgatgatgattgtagtgtagta
tatgagacgttagtgaatccccaaaatcctatagtcgattataatacgaggttttctggg
attacagaagaaaatatgaaagacgtgacaacaacgttattagatgtccaagcaacattg
ttaacaatgttttcagataaaactatattagtgggtcatagtttagaaagcgatttcaaa
gctttaaggcttttgcacgatactgtcgttgatacaagcgtgatgtttccacacaaaaat
ggctatccacaaaagagagcattgaagaatctttgttccgaatatttaagaaagatcatt
caaaatgacgttggtggacacgacagcaaagaggatgctgtcgcttgtatggagttaatt
ctttggaaagcaaaggaagaagcaaaattacaataa
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