Bombus terrestris (buff-tailed bumblebee): 100644563
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Entry
100644563 CDS
T04364
Name
(RefSeq) vacuolar protein sorting-associated protein 13 isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bter04131
]
100644563
Membrane trafficking [BR:
bter04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100644563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
DUF5117
Motif
Other DBs
NCBI-GeneID:
100644563
NCBI-ProteinID:
XP_012166557
UniProt:
A0A6P3TSC7
A0A9B2JIW8
LinkDB
All DBs
Position
8:5256557..5276270
Genome browser
AA seq
3331 aa
AA seq
DB search
MVFESIVTELLNKVLGEYIQNLDCTQLKLSLWGGDVVLKDLLIKESALDILDLPIRLEYG
RLGKLILKIPFKDMWNGQIDAIVEELFILVVPSSQVAYDAEKEARIQLEAKHAELARVEK
KKQLADIKSQEKLDDSMIEKLIARMIKNIHIEIKKIHVRYEDHISYKDHPFSVGFTLSTF
TLESCTDSWQTTGNLKDMYAIPQIYKLCTLDGLAVYLNTTLEQFSNTKSDYLNLFHNGIA
TIDYNPPGYQYLLGPINVNAKLKLNPKPETDGSNYTIPKVWLDMEMQKLRIGLARKQYQT
IVQLGEGLDQAQKAAPFRKYRPNLTSYRGHYKEWWKFAYVCVLEEEVRRKRRNWDWNHMK
EHRDMCRSYADSYQTKLTTKKVTQEIVDHLTQCERKLDIFNLVIIRQKIEMEVERMAERE
KNLKAKRGWFGFLWSSTQTEETQELNSAAAIMRKFEQAMTPQEKEKLYRAIDYQENSAPA
HYPETYEMIDTRFLLHELQIIILDTDKEYPCILDLQLHSVEAGFKSRPSANAILVTASIN
EMKLLGTKQDEHIPSLFNSHQHGADNVLISVSYEKNPLDKLCGDRIIVKSKSVDIIYDAQ
TVIEIVNLFKVQNSSTLNNLQAAAAVQLEGLKEMSALGLEHAIQKHSVLDIQVNMQASQL
IIPHDGFYDSTKSLLVVNLGSLQIHSLEKPKGDDKTNVSVKQLISMGKTEEDVLLHLREH
SYDKFVLKIVDFQVLVSLPGEEWRTVLSNVDDSMTLLHPTTLEIQFHKCLVTDDPLLPKL
RLIGQLPSVVVNITDIRLLQALSIAQSIPQPKEEPTDLQKSSMSKSVSQLSLLKDITTTI
AEKKKEEDSTVTSVKQTIDMEMKFEMKEFAIQVSSQKGNEIIPFVKFEVLQLEAEMLQRT
YDQEISLRLGGVQVKQHYNQREIFMITTPMLSGRHEYLITVQYINVNKRSPEFKTKHGSV
LQLLKLEFTTLNVLLHQEALINLLQFISYVQDQMNVIANSKLEKEPRIRPRPSHLVSIQE
ETSTFLREQIQKQKLRSTTRRRRTMMEHVDLKVQAKVGTICMKITSDCREITAFYIDGIT
AGFIMKASYSQANVNLSSISIKDLNEASGYKDIVSVTEDTESLQIQAIMYNIEPSDIDKN
NMSITVVMGCYRIVFLNMFVTSIMSFLNNFQTAQQAIKDASAAAAEAAKTNIKDVKESAA
RIGLAVKIKAPVIYVPMHSKSDHCLTLDMGNLTICNVFKKLEVTNDAGDCPIVDEMRIEL
QNLKLSRVRLNMEKFAIENEILLLEPVSFTLLIKRNLSTAWFTSIPDIDMSGRLNKINIL
ISKEDYATALKVLEKNLSETVEDTKLTASVSQSEKKLEVEVLQHRQSDRFARATAEDAED
PNSQEQVHTHTSIKFEFVMDSLMITLFTGGSKMLQSQSSLLHLPENGLAKFCLTHFALKG
RIFADGLMATSILLMNCTLDDIRQNRQGSLTRIMERTTAVPSMDDIEKESKPVRSMLDMT
IRQSSNDMFVDIRVFSFSIIVSLDYLMKVKDFFTTDEPSTNKTVQPKNYNESAVKKKQTV
SSTKKMFTVNIHIEKPDIILLEDMDDINSNCIILNTELLLKVRMMDEHQVIAGTIKDLSI
LAGIYNTAKRSDWIYQVLRPCSISVAGSTPEGKGLHIDICCTDIHLSVSPGVIEILNKVV
HTATKTQEQDQEVIITERNYEGLWVVTPFEENDFWFLKTEVGVEAIEDIVYSDDEDSTVY
KPELAIISAPTILLTLEAGIGNKTLPMLLLHIGFESNISDWSTKTMNMEYTMSVVMAYYN
SCLALWEPLIEPIEGIRNEKRVSTPWELKVKIQFNDVSPDSRGASAASPTSESETEELHQ
IPKMSIDIISTENLEITMTKTCLDVLQQLGNAFSSAMEASGKGAAKSVAPYVLKNETGLA
IVLDLERSHFKVFNDGSKFTSNNTDSYMEVILESGASVQLAPRTTKTEIPLLDQLKIETI
KEKDDDKFIISFKEINRTLAVPVLRADKRFFSLKYRKDGSEEWGIVSDVIVDEGSTIVTL
RSILQVHNHFSQPISVYYMTKRGNEVECVGTVAPDSKLNLPLDTVYTPTNVYGLFFSVEG
YMVSLEQFIWKDLQKTVSMTKLLKCEARVRQEAVEPFYIKMFFMMIVVGSILYNNNTIGL
LLNAINWRSVFCRFIDCVKRLCLKTLPSEHKKYLEAPIQVVGEMEQVYFESTSRHTIAST
IYNVHLYPAVYLKNFLPIDIIVCLPGSVQEKLLEAGTSYQIPTIDPGKSYIIIKLPNYLE
KDWSCKGEILANPPEFSVWSFESFDSAQKVIMDLGMHTSYKHGSIIMALYCPFWMLNKTG
LMLSYRKSSKGGKEHSSPIKNLVCVKPHQSRTEYKRKKARLSGEDHLNVLYHPENFKGPI
LFSFRSKVFFGKKKAMIRVENGEWSDKFPIDVAGSEGVVICKYNGQIYQIGVHNQLTYNS
LTKQITFTPYYVLINNSDYLIECQEGNRPADPMIKVPARECAAYWPRSDHEQKTLSARIA
GNPEKTAPFIYTENHTTLLKLNNKYGGINVDIQISEGGVYISLSAYTHGNAPALIINHTP
HTINFWEKGSLNVRSVQSYNRMFYTWEHPAGPRKLVWEDNNKKEIEETLRKDTLGGFQLP
DLEEEVYYVSFLDGTQRVLLFTTNMKVAEDCELAGDFEPIEQEITISIHGVGFSLVNNIM
RTELLYLCIASSGIMWETRKSVNHRWRNLDTREVMVIEEGYQKYIRELQMDRSPIQKVIL
EPKLEVDYLNMEMLKPHRRCLRRTFQTGLWLQYRTSVHQVQLHAKINRLQIDNQLTDCVF
PVILAPVPPPKSVTASTVMKPFAELSMVKRLLEHSNVQQFRYFKVLIQEFHVKVDIIFIN
AIVGLFEANEMNDAEESKLFKLDMELVDEPLMYHVSLITTAEQKNFFDLLHFSPLKIHIS
FSMSGSGSGPSALPQVLNVLLQGIGVTLTDINDIVFKLAYFEREYIFMTNKQLISEATTH
YVGQAIKQVYVLVLGLDVIGNPYGLVVGTMKGIEDLFYEPFQGAIQGPGEFAEGLLLGMR
SMLGHTVGGMAGAVSKITGAMGKGIAALTFDKDYQRKRQEQLNKQPANLQEGLARSGKGL
IMGVVDGVTGVVMKPISGAKEEGVEGFFKGFGKGMVGLVTRPTAGVIDFASGSFGAVKRA
TELNEEVKKVRPSRFLQLDCLVRPYVRDEAEGHKILCELEKGKYANTDIYFYHMYINKDV
LLLTDKRIAYLEHSDLFGGWRVHWTHAWQEMSEQPKIVDKGVQIFIKDSSKKKKLGLFGS
TDQSKIILIPDYNIRQLLCDKMQQQINQYEL
NT seq
9996 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgagtcgattgttaccgagctcctgaacaaggtgttgggagagtatattcaa
aatttggattgcacgcaattaaaactgagcttatggggaggtgatgtagtgttaaaagac
ttattaataaaagaaagtgcattagatatattggatctacctattcgattggaatatgga
agattaggaaaacttatattaaaaataccattcaaagatatgtggaatggacaaattgat
gcaatagttgaggaactatttatacttgtagtaccttcaagtcaggttgcttatgatgca
gaaaaagaagcaagaatacaacttgaagcaaaacatgcagaacttgcaagagttgaaaaa
aagaaacaattagcagatatcaaatcacaagaaaaactagatgattcaatgattgaaaaa
ctcattgcccgtatgataaagaatattcacattgaaatcaaaaagatacacgtgagatat
gaagatcatatctcatacaaagaccatcctttttcagttggttttacattgagtacattt
accttagaaagttgtacagattcttggcaaacaactggtaacttaaaagatatgtatgct
attccacaaatttacaagttatgtacactagatggtttggcagtgtatctcaatacaact
ctagaacagtttagtaatacaaaatcagattatttaaatttatttcataatggaattgca
accatagattataatccacctggttatcaatacttattaggtccaatcaatgtcaatgca
aaattaaaattaaatccaaagccagaaacagatggaagtaactacacgattcccaaggta
tggttagacatggaaatgcaaaaattaagaataggattagcaaggaaacaatatcaaacc
atcgttcaattaggggagggtttagatcaagctcagaaagctgcaccatttagaaagtat
agaccaaatttaacatcatatagaggacattataaagaatggtggaagtttgcatatgtt
tgtgtcttagaagaagaagtacgtagaaaacgtagaaattgggattggaatcatatgaaa
gagcatcgagatatgtgtcgctcttatgctgacagttatcaaacaaaattaacgaccaaa
aaagtcacacaagaaatagtagatcatcttactcagtgtgaaagaaaattggacattttt
aatttagtcattattaggcaaaagatagaaatggaagtagaaagaatggctgaaagagaa
aaaaatctaaaagcgaaacgcggttggttcggtttcttgtggtccagtacacaaacagag
gaaacacaagaattgaactctgcagctgctataatgcggaaattcgagcaggcaatgaca
ccacaagagaaagaaaagttatatagagcgattgactatcaagaaaatagtgcaccagct
cattatcccgaaacatatgaaatgatcgacacgcgatttcttttacatgagctacaaatt
ataattttagatacagataaagagtatccttgtattttggatcttcaacttcatagtgtt
gaggctggtttcaaatcgagaccatctgctaatgctattttagttacagcatcaattaat
gagatgaaattattaggaacgaaacaagatgaacatattccttcactttttaattcccat
cagcatggcgcagataatgttttaatatcagtgtcatatgaaaagaatcctctcgataaa
ttatgtggtgatcgtataatagtaaaatcgaaatctgtggatattatttacgatgcacag
actgtgatagaaatagttaacttgtttaaagtacaaaattcatcgactttgaacaatctt
caagcagctgctgccgtacaattagaaggtttgaaagaaatgtcggctttaggtttggag
catgctattcaaaagcattcagtattagacatacaggttaatatgcaagcttctcagtta
atcataccacatgatggattttatgatagtacgaaatcattattagttgtaaatcttggt
agcttgcaaatacattctttggaaaaaccaaagggcgatgataagacaaatgtatctgtt
aaacaattaatcagcatgggtaaaactgaagaagatgtgctattgcatcttagagaacat
agttatgataaatttgttttaaagatagtcgattttcaagtattagtttcattgcctggt
gaagaatggcgcacagtattatcaaatgtggatgattctatgacattattacacccaaca
acgcttgaaatccaatttcacaaatgtttagtaacggatgatccattacttccaaaatta
aggttgataggccaattaccatcagttgttgttaatataacagatattcgtttattgcaa
gctctttctattgctcagagcataccgcagccaaaagaggaaccaacagatctccagaag
tcatctatgagtaaatctgtttcacaattatctttgctgaaagatataactaccaccatt
gctgagaagaagaaagaagaagattctactgtaacttcagttaaacaaacgattgatatg
gaaatgaaatttgaaatgaaagaatttgcaatacaagtttcatcccaaaagggtaatgaa
ataataccatttgtgaagttcgaggtactacagttagaagcagagatgttacaacggact
tatgatcaagagatatcattaagattaggtggagttcaagtcaagcaacattacaatcaa
agagaaatatttatgataaccactccaatgttatcaggtagacatgaatatttgataaca
gtacagtatataaatgtaaataagcgatctcctgaatttaagacgaaacatggatctgtt
cttcaattactaaaattagaatttacaacattgaatgttttattacatcaagaagctctt
ataaatcttcttcaatttatatcatatgtgcaggatcaaatgaatgtcatagcaaatagt
aaacttgaaaaagagcctcgcatacgtccacgaccttctcatttggtttccattcaagaa
gaaacttctacatttttaagagaacaaattcaaaagcaaaaacttaggtcaacgacacga
cggagaagaacaatgatggagcatgtagatctaaaagttcaagcaaaagttgggactatt
tgtatgaagataactagcgattgtagagaaattactgcattttatatcgacggtatcact
gccggatttataatgaaagcttcctattctcaagcaaatgttaatttatcttctattagc
attaaagatcttaacgaagcgtcaggttataaggatattgtatcagtgacagaagatact
gaatccttacaaatccaagctataatgtataatattgagccgtcagacattgataaaaat
aatatgtctatcacagttgttatgggctgttatcgtattgtctttttgaatatgtttgtt
actagtataatgagctttttaaacaattttcaaacggctcaacaagccataaaggatgca
tcagcagcagctgcagaagccgcgaagacaaatattaaagacgttaaagaaagcgcggca
cgtattggtcttgcagtaaaaattaaagctccagttatatatgtaccaatgcattcgaaa
agcgatcattgtttaacactagatatgggtaaccttactatatgtaatgtttttaagaag
ttagaagttacaaatgatgctggagattgtcctattgtcgatgaaatgagaatcgagcta
caaaatttaaagttatcccgcgtaagactaaatatggagaagttcgcgattgaaaacgaa
atattgctgttagaaccagttagttttacattactcattaaacgtaatttatctactgct
tggtttacatctatacctgatattgacatgtcgggtagactaaataaaattaatatatta
ataagtaaagaggactatgcgactgcattgaaagtattagaaaaaaatttaagtgaaaca
gttgaagatacaaagctcacggcaagtgttagtcaatccgaaaagaaacttgaagtagaa
gttttacaacatcgacaaagtgataggtttgcaagagctactgcagaagatgcagaagat
ccaaattcacaagagcaagtacatacacacacgtccatcaaatttgagtttgttatggac
agtcttatgattactttatttacgggaggttcaaaaatgctgcaatcacaaagttctctg
cttcatttaccggagaatggattagcgaaattttgtttaacccatttcgcgttaaaaggt
cgaatatttgccgatggattaatggcaacttcaattcttcttatgaactgtactttggac
gacatacgtcaaaatagacaaggttctcttacaagaatcatggaaagaactacggcagtg
ccttctatggatgatatagaaaaagaatccaaacctgttcgcagtatgttagatatgact
attagacaaagttcaaatgacatgtttgttgatattcgagtcttttcatttagtattatt
gtgtcacttgactatttaatgaaagtgaaagattttttcactactgatgaaccatcgaca
aataaaacagtgcaaccaaagaattataacgaatcagcagttaaaaagaaacaaactgta
tcatcaaccaaaaaaatgtttacggttaatatacatattgaaaaacccgatattattttg
ttagaggacatggatgacataaattccaattgtatcatattaaatactgaactactgttg
aaagtacgtatgatggatgaacatcaagtaatagctggcaccataaaagatttatcgatt
ctagctggtatatataataccgcgaagagaagtgattggatatatcaggtgctaagacca
tgcagtataagtgtagcaggttctacgccagaaggaaaaggacttcacattgatatttgt
tgcacagacattcacttatcagtttccccaggtgtcatagaaatattgaataaagtagtt
catactgctacaaagacacaagagcaagatcaggaagttattattactgagcgaaattat
gaaggattatgggttgtcactccatttgaagaaaatgatttttggtttttaaaaacagaa
gtaggagtagaagccatagaagatattgtatattctgatgatgaagattctacagtttat
aagccagaattagcaataatctctgcaccaacaattttactcacattagaagcaggcatt
ggtaataaaacattgccaatgcttctacttcatattggctttgaaagcaacattagtgat
tggagtacaaaaactatgaacatggagtatacaatgtcggtagttatggcatattataat
agctgtctagcattgtgggaaccattaattgaaccaatagaggggatcagaaatgaaaag
cgggtttctacaccttgggaactaaaagttaaaattcaatttaatgatgtatcaccggat
tctagaggcgcaagtgcggccagtcctacatcagagagtgaaacagaagaattgcatcag
attcccaaaatgtctattgatataatatcaactgaaaatttggaaataaccatgactaaa
acatgtctcgacgtattacaacaactcggtaatgcattttcatctgccatggaagctagt
gggaaaggagcggctaaaagtgtagcaccatatgtacttaagaatgaaactggtttagcg
atagttttagatttggagcgcagtcacttcaaggtttttaatgatggatccaaatttaca
agtaataacacagattcgtatatggaagtaattcttgaatctggtgcatcagtacagtta
gctccgaggacaacaaaaactgagataccactgcttgatcaattgaaaattgaaacaatt
aaagaaaaagacgatgataagtttattatttcgtttaaagaaattaatagaactttggct
gtacccgtgttaagagctgataaaagattcttttcactgaaatatcgaaaggacggttct
gaagaatggggtattgtttctgatgttatagtagatgaaggaagtactattgttactctt
agaagtattctacaggtacacaatcattttagtcaaccaatatctgtatattatatgact
aagcgtggaaatgaagttgaatgtgtgggaactgttgctccagatagtaaattaaatctt
ccactagacactgtatatacaccaacaaatgtttatgggctatttttcagtgttgaagga
tatatggtttcgctagaacaatttatctggaaagatttacaaaaaacagttagtatgaca
aaactgttaaaatgcgaagctcgagtgaggcaagaagctgtagaaccattttacataaag
atgtttttcatgatgattgtggttggtagtattttatataataacaacactattggctta
ttattgaatgctattaactggcgatccgtattctgtcgtttcattgattgcgtcaagcgt
ctttgcttgaaaactttaccctcagagcacaaaaaatatctggaagcacctatacaggtt
gttggtgaaatggaacaagtttattttgagagtactagtcgacatactatagcaagtaca
atctataatgttcatttatacccagctgtatatttgaagaattttttgcctatcgatatt
attgtatgtttacctggaagtgtacaagaaaaacttctagaagctggcacatcttatcag
attcctacaattgacccaggaaaatcttatataatcataaaattaccaaattatttagaa
aaagattggtcatgtaaaggtgagatacttgcgaatccaccagaattttctgtatggtct
tttgaatcttttgatagtgcacaaaaagttataatggatttgggaatgcatacatcatac
aaacatggttctatcattatggctttatattgtccattttggatgttaaataaaacaggc
ttgatgttgtcttatcggaaatcaagtaagggtggcaaagaacactcaagtccaatcaag
aatttggtttgtgtgaaacctcatcaatcacgtacagaatacaagaggaagaaagcacgt
ttgagtggagaagatcatctaaatgtgctttatcatccagagaattttaagggaccaata
ttgttctcatttcgctccaaagtgttctttggtaaaaagaaagcaatgatcagagtcgag
aatggtgaatggtcagataaatttccaatagatgttgcaggaagtgagggagtagtcatt
tgtaaatataatggccaaatatatcaaattggagttcacaatcaattaacttataattct
ttgacaaaacaaattacatttactccatattatgtactgataaataactctgattatctc
attgaatgccaagaaggtaataggccagctgatcctatgatcaaggtacctgccagagaa
tgtgcagcttattggcctcgttctgatcatgaacaaaaaactctaagtgctagaatcgca
ggtaaccctgaaaaaactgcaccatttatttacacagagaaccatacgactttgttaaaa
ttaaataataagtatggaggaattaatgtagatatacaaataagtgaaggtggagtctac
atttctttatctgcatacactcatggaaatgccccagctttaattattaatcacactcca
catacaatcaatttctgggaaaaaggttcactaaatgtcagatccgtacagtcatacaat
agaatgttttacacttgggaacatcctgcaggtccacggaaattagtctgggaagacaac
aataaaaaagaaattgaagaaactcttcgaaaggacactttaggaggttttcaattgcca
gatctagaagaagaagtatactatgtatcatttttagatggtacacaacgagtacttcta
tttacaacaaatatgaaagttgcagaagattgtgaactagcaggtgattttgaacctata
gaacaggaaataacaataagtattcacggagttggcttctcactcgttaacaacatcatg
agaactgaattgttatatttgtgtatagctagttctggaattatgtgggaaacgcgcaaa
tctgttaatcatcgttggcgcaatcttgacacaagagaggtaatggttatagaagaaggc
tatcaaaaatatatacgtgaattacaaatggacagaagtccaatacagaaagtaatactt
gaaccaaaattagaggttgattatttaaatatggaaatgttaaaaccacatcgtcgttgt
ctacgacgcacttttcaaactggtttatggttgcaataccgtacttcagtgcatcaagtg
cagttacacgcaaagatcaacaggctgcaaattgataatcaacttacagactgcgttttc
ccagttatattagctccagttccgccaccaaagagtgttacagcgagcacagttatgaaa
ccattcgctgaacttagtatggttaaacggctacttgaacatagtaatgtacaacaattt
cggtactttaaggttcttatacaagagtttcatgtgaaagtagatattatatttattaac
gcgatcgtgggactgtttgaagcaaatgaaatgaacgatgcagaagaaagtaaattattt
aaattggacatggaactcgttgatgaacctctgatgtatcacgtcagtttaattactaca
gccgaacagaagaatttctttgatctacttcacttttctcccttgaagattcatataagt
ttctcaatgagcggtagtggtagcgggccatctgcactacctcaagtattaaatgtattg
ttacaaggaataggtgttacgttaactgacattaatgatattgtcttcaaattagcatat
ttcgaaagagagtacatttttatgaccaataaacagcttatttccgaagcaacaacacat
tatgtaggacaagcaattaaacaagtttacgttctcgttctgggtctcgatgtaataggc
aatccgtatggcctagtagtaggtactatgaagggcattgaagatttgttttatgaacct
ttccaaggtgccatacaagggcctggagaatttgcagaaggtttgcttcttggtatgagg
agtatgttaggtcacactgttggaggaatggctggagctgtttctaaaattactggagct
atgggtaaaggtatagctgctttaacgtttgacaaagactatcagagaaaacgacaagaa
cagcttaacaaacagccagccaacttgcaagaaggtcttgctcgtagtggaaagggtttg
ataatgggtgttgttgatggtgtaactggtgttgtgatgaagcccatatcgggtgccaaa
gaagaaggtgtggaaggattctttaaaggatttggaaaaggcatggttggtcttgttact
cgaccaactgctggagttatagattttgctagtggttcatttggagcagtgaaacgtgca
actgagttgaatgaagaggtaaagaaagtaagaccatctagatttttacaactagactgc
ttggttagaccatatgtcagagatgaagctgagggacataaaatcttatgtgaattagaa
aaaggaaaatatgcgaatactgatatctatttttatcacatgtacattaacaaagatgta
ttattgcttactgataagagaatagcatacttagaacatagtgatttatttggcggatgg
cgggtgcattggacccacgcgtggcaagagatgagcgaacaaccgaaaatagttgataag
ggagttcagatatttatcaaagattccagtaagaagaagaaattaggattatttggtagt
acagatcaatcaaaaataattttaatacctgattataatattagacagcttctatgcgat
aaaatgcaacaacaaattaatcagtacgagttgtaa
DBGET
integrated database retrieval system
