KEGG   Bombus terrestris (buff-tailed bumblebee): 100644633
Entry
100644633         CDS       T04364                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03030  DNA replication
bter03410  Base excision repair
bter03420  Nucleotide excision repair
bter03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100644633
   03410 Base excision repair
    100644633
   03420 Nucleotide excision repair
    100644633
   03430 Mismatch repair
    100644633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bter03032]
    100644633
   03400 DNA repair and recombination proteins [BR:bter03400]
    100644633
Enzymes [BR:bter01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100644633
    6.5.1.6  DNA ligase (ATP or NAD+)
     100644633
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     100644633
DNA replication proteins [BR:bter03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100644633
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     100644633
DNA repair and recombination proteins [BR:bter03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100644633
   NER (nucleotide excision repair)
    Other NER factors
     100644633
   MMR (mismatch excision repair)
    Other MMR factors
     100644633
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 100644633
NCBI-ProteinID: XP_048260359
UniProt: A0A9C6S7F1
LinkDB
Position
3:4582157..4587325
AA seq 953 aa
MYTRITFNLRSIVFNNIYSRPVIFLSKQFQLNAFFPIVNNVLNRILANSKIVKNGDQSNS
GNPKRKRDDSGDSSETASSPIGNSSRKKSVSKSPSLLKKVNGTPKIKLSPTVTTMEKEKR
KSKTPLTATKKKRKVNEVKSTPKKSDAKKKLKDLSSDKDQKENELTVEKKTETSDGFESS
KSSPKESKTKKNVKNIEKKATKKRSRIIAPVDSSDEEEHNLLPESPKKANLDVEENNPIN
EEENSNEDVLDIQKDSEEEEKKKEDNIEKPTKKIHNFFAPKEKESTNNTDKDKKKSSSHS
YKPSASKYDPINDAFWKRGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSPD
DLLPSIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAEG
SRSNQRTMFRPAPLTVSNVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIRS
LAGKLRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLKT
TYCECPNYDKIIPVLLKEGIEELSNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTC
EWKYDGERAQIHLAEDGKINIYSRNQENNTSKYPDIIGRLKNTQGEEVKSCILDCEAVAW
DNENKQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKKN
FKEVIGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKL
KKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFSEEDL
QKHTEFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDPE
KGISLRFPRFVRIRDDKNNEDATSAQQIADMYNSQEQIKNQTSSTKVAEEDFY
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgtatactcgtattacgttcaatttgagatcaattgtattcaataatatttattcgcga
cctgtgatatttttaagtaaacaattccaattgaatgcttttttccctattgtaaataat
gttcttaatcggatactcgctaatagcaaaattgtaaagaatggagaccaaagcaattcg
ggaaaccctaaacgaaaaagagacgatagtggagatagcagtgaaactgccagttcacct
attggaaattcctcaaggaagaaatcagtctcaaaatctccttcactactgaagaaagta
aatggaacaccaaaaattaagctatcaccaacagtaacaactatggaaaaagaaaaaaga
aaaagcaaaactccacttactgctactaaaaagaaaagaaaagtcaatgaagtaaaaagt
acccctaagaagagcgatgcaaagaagaaattgaaagatctgtcaagtgataaggaccag
aaagaaaatgagttaactgtagagaaaaaaacagaaacaagtgatggatttgaatcttca
aagtcttcgcctaaggaatctaaaactaaaaagaatgttaaaaatattgaaaagaaagct
actaaaaaaaggtcaaggataatagcacctgtcgattccagtgacgaagaagaacataat
ctattgccagagagtcccaaaaaagcaaatcttgatgtagaggaaaataacccaattaat
gaagaagaaaattctaatgaggatgttctagatattcaaaaggacagcgaagaagaagaa
aagaaaaaagaagacaatatagagaagcctacgaagaagatacataatttttttgctcca
aaagagaaagaaagtacaaacaatactgataaagataagaaaaagtcttccagtcactct
tataaacctagtgcctcgaaatatgacccaataaatgatgcattttggaaacggggagaa
aaggtaccatatattgcgttgacacgtaccttggaattgatcgaagatacaagcgctcga
ttaaaaataatagaaattttatcaaattatttccgatctgtaatagttttaagcccagat
gacttacttccaagtatatatttatgtctcaatcaattagcacctgcttatgaagggatt
gaattaggggtggcagaaacaaatttgatgaaagctatagcacaatgtactggtagaaca
ttagctcaaattaaagcagacgtccaaacagttggggatttgggcatcgtagcagaagga
agtcgttccaatcaaagaactatgtttcgacctgctccactgacagtatcgaatgtatat
actaggctgaaagagatcgcacaaatgactggttctgcgtctttaaccaaaaaattggat
aaaattcaatcgctttttgtagcgtgtcgttttactgaagccagatatctgattcggtcc
ctagccggcaaacttcgaattggtctagcagaacaatctgtgttacaagctttggcacta
gcatgtactatgacaccaccaatacaaagttatccaccggaagttttagacgtgagtaag
aaaatgtcaagcgatgcctttaaacaaaagtacgacgaaactgcgcttactcttaaaaca
acatattgtgaatgtccaaattatgacaaaataatccctgttttattaaaagaggggatt
gaagaattatcaaacaaatgtaaaattacacctggcatacctatgaagccaatgttggca
catcctactaaaggtgtgcaagaagtattaacgcgtttcgatgggttgaaatttacttgt
gaatggaagtacgatggagaaagagcgcagattcatttagccgaggatggtaaaattaat
atttacagtagaaatcaagaaaataataccagcaaatatcctgatattataggaagatta
aaaaatactcaaggtgaagaagttaaaagttgtatccttgactgtgaagcagtagcttgg
gataacgagaataaacaaatcctacctttccaaatactcagtacaagaaaacgcaaggat
gcgaacgaagcagacattaaagttcaagtatgtgtgttcatgtttgatttattgtattta
aatggagaaccactggtacaacaacctttcataaaacgtcgtgaattattgaaaaagaat
ttcaaagaagtaattggagaatggaaatttgcaactagtttagatacttcgactatggaa
caagtgcaagatttcttagatgaatcagtcaaaggcaattgcgagggtcttatggtgaag
accttagaacaggatgcaacatatgagattgctaaacgttctcggaattggttaaaattg
aagaaagattatttagaaggtgtaggtgatacattagacgtggttgtcattggtggctat
ataggcaaaggaaaaaggacaggaacctatggaggatttcttttagcttgttatgatcaa
gagaatgaggaatatcaaagtgtttgtaaaattggtactggatttagtgaagaagacctt
caaaagcacacagaattcttcaaagaacatataataccacaaactaagtcctactatcgt
tatgactcgtctctcgaacctgatcactggttcgagccagttcaagtgtgggaaattaaa
tgtgcagatctttctttgtcacctgttcataaggcagccgttggtattattgatccagag
aaaggaatatctttgcgatttccacgttttgtccgcattcgcgatgataaaaacaatgag
gatgctacatcagcgcaacaaattgcagatatgtacaatagtcaagagcagataaaaaat
cagacatcatcaacaaaagtagctgaagaagacttttattga

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