Bombus terrestris (buff-tailed bumblebee): 100644714
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Entry
100644714 CDS
T04364
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X3
KO
K12883
nuclear cap-binding protein subunit 2
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03015
mRNA surveillance pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100644714
09122 Translation
03013 Nucleocytoplasmic transport
100644714
03015 mRNA surveillance pathway
100644714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100644714
03041 Spliceosome [BR:
bter03041
]
100644714
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100644714
Spliceosome [BR:
bter03041
]
Common components
Common spliceosomal components
Cap binding complex
100644714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF3602
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
100644714
NCBI-ProteinID:
XP_003394780
UniProt:
A0A9B0BID3
LinkDB
All DBs
Position
4:18165755..18168096
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AA seq
166 aa
AA seq
DB search
MATIKLNPSTSPSVELSSYRDQHFKGSRAEQDRLLRISTTLYVGNLSFYTTEEQIYELFS
KCGDIRRIIMGLDKYKKTPCGFCFVEYYQRADAENCMRYINGTRLDDRIIRTDWDAGFIE
GRQYGRGKTGGQVRDEYRSDFDSGRGGYGKIIQQKVTPLSDGAFGR
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggccacaataaaattaaatccgtcaacttcgccttccgttgaattaagttcatatcgc
gatcaacattttaagggttcaagagctgagcaggatagactcttaagaatttctacaact
ttatatgttggaaatttatcgttttatactacagaggaacaaatatacgaactattttca
aaatgtggcgatattagaagaattattatgggattggataaatataaaaagacaccttgt
ggtttttgtttcgttgagtattatcaaagggctgatgctgaaaattgtatgcgatatatt
aatggtactcgtttagatgatagaattattagaacagattgggatgctggttttatcgaa
ggcaggcaatatggaagaggcaaaactggaggacaagtaagagatgaatacagatcagac
tttgatagtggaagaggaggctatggtaaaataatacaacaaaaagtaactccactttct
gatggagcttttggacgttaa
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