Bombus terrestris (buff-tailed bumblebee): 100644770
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Entry
100644770 CDS
T04364
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100644770
03015 mRNA surveillance pathway
100644770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100644770
03041 Spliceosome [BR:
bter03041
]
100644770
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100644770
Spliceosome [BR:
bter03041
]
Complex C
Other components
EJC/TREX
100644770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
100644770
NCBI-ProteinID:
XP_012167941
UniProt:
A0A9B2JP10
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All DBs
Position
10:complement(7333817..7337419)
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AA seq
378 aa
AA seq
DB search
MRKLDTQEAWGAERLEAQLEAARDGLRGLDRSIRKILGRDLPDGENGPLQPPPRLSQKRP
LQEDRRRVVSDFVNNELPGGKRRWQGSNGEPKTVFSRLSARVPSNNDDSADEDDNVIKPA
VSSRVIATPREIPSRQEVIRRERIDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKK
AEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRAAQLPLA
SFIKTRAQPPIYYVPKRKHPQTDILLTQSAKELHEEIERREKALVEELELIEVQVGLGKH
QQNFDGSATLNTTAEVPQSTEEGEENRDPNPEKNLESENNEPADVSMKSDKDENYENTND
IEKKEEVKVDEAKDENNG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattagatacacaagaggcctggggtgccgaaaggttagaagcgcaattagaa
gccgctcgagatggtcttcggggactcgatcgaagtattcgaaagattttgggccgggat
ctgcctgatggagaaaacggaccgctacaaccaccacccagattatcacaaaagagacca
ttgcaagaggatagaaggcgtgttgtttctgattttgtcaacaatgaactacctggtgga
aaaaggagatggcaaggttcaaatggtgaaccaaaaacagttttcagtcggttaagtgca
cgtgttccttctaataatgacgatagtgctgatgaagatgataatgttattaagccagca
gtgtcttcgagagtgatagcaacaccgagagagattccatctagacaggaagttattaga
cgggaaagaatagatgaacgtagcaggcaaaggaataaacgaatgtttggtgccctttta
ggaacattacagaaatttcggcaagaagaaactaaactgaaagcaaaggaagataaaaaa
gcagaagtagaggcaagagtagaagaagccagaagaagagaaaaggaagaattacgacga
gaaagacaacaattattcttatcgcgtaaacggcaactagcagaagttcgagcactagag
gcaaaattggcgcgcagccgacaatttcaagattggcgtgcggcgcaattaccacttgct
tcgtttataaaaacgcgtgcccaacctcctatttattacgtaccaaagcgtaaacatcca
caaactgatattctactaacgcaatctgcgaaagaacttcatgaggagatcgaaagaagg
gagaaggcattggtcgaagagctggaacttatagaagtgcaagtaggtctcgggaaacat
caacaaaattttgatggatccgcaacattaaatacaacagcggaagttccacagtcgacg
gaagaaggagaagaaaatcgcgatccaaatccagagaagaacttagaatcagagaataac
gaaccggctgatgtttccatgaaatccgacaaggatgaaaattacgaaaacacgaatgat
attgaaaagaaggaggaagtaaaggtagatgaagcaaaagatgaaaataatggctag
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