Bombus terrestris (buff-tailed bumblebee): 100645155
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Entry
100645155 CDS
T04364
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100645155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100645155
Spliceosome [BR:
bter03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100645155
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_SCAP
Ge1_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Nbas_N
Motif
Other DBs
NCBI-GeneID:
100645155
NCBI-ProteinID:
XP_003392963
UniProt:
A0A9C6SGJ7
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Position
1:complement(1471042..1473697)
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AA seq
525 aa
AA seq
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MSDDEDLVYVKKQKTVHYGSLEEAERARLVAVAESSEEEKNITNLGDNANATATLGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLDEPICLFGEGPAD
RRTRLRELLANLGEDAIKKKHEEEEKPSHPIERDTETTWYHEGPDSLQIARSWIATYSLP
RAKARLGKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKLLA
TASWSGLCKIWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEEVVGEKSGQTCVLASCAS
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQGDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTSKIWDLRKRSCVYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIGTSSYDRTFKLWAPENM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacgaagatttggtttatgttaagaagcaaaagactgttcattatggatcc
ctcgaagaagcagagcgtgctagattggttgctgtggctgaatcttctgaagaagaaaaa
aatatcacaaatttgggagataatgccaatgctacagctactttgggaaacattcatata
tcaaatgaatatatggaacttgaagatgagatgtctaaagatagacaagctctcttagaa
gaatttgaacgtagaaagaaagctcgtcaaatcaatgtgtccactgatgattctgaagta
aagaaaaatttgagacaattggacgagcctatttgtctctttggtgaaggacctgcagat
aggagaacaagactgagggaattattggctaatttgggtgaagatgcaattaaaaagaaa
cacgaagaggaggaaaaaccatcccatccaattgagagagacacagaaacaacatggtat
cacgaagggccagactcacttcaaatagcacgttcttggattgctacttattcattgccc
agagcaaaggcaagattgggtaaggcaaggcaggatttggagttgccaacagctacacgt
acagcacgtcgtcaagagcttctaaaaaagttacaagctttgacaatttactgttctcaa
attggagatactaggccaatttctttctgtcagttcagtccaaattccaaattgctcgct
acagcttcatggtcaggcttgtgtaaaatatggtctgtacctgactgtactttgttaaga
acacttaagggacacacttgtaatgttggctgcattgtttttcatccaaaagctactatt
actgaagaggtggtaggagaaaaatctggacagacttgtgtgttagcatcttgcgcttcg
gatggaacagtaaagttgtggagtggtggatctggggaggaacccttagctgaagtcgaa
ggacatgaaccacacagagtttcaaggctagcatttcatccatcgggtagatttcttggg
acatgttgctatgatgcatcttggagactttgggacttggaacagcaagcagaagtctta
catcaggaaggtcatgccagagctgtgcattgtattagttttcagggtgatggtagtgtc
agcgccacaggtggtcatgactctttcggtcgagtgtgggaccttcgcacaggacgatgc
attatgtttatggagggtcatctgaaatctatctttggtatcgatttctccccgaatgga
tttcacatagcaacagcgagcgaagataatacttctaagatatgggatttacgaaagaga
tcttgcgtgtatacgatacctgcgcacacaaatttactatcagacgtgaaataccaaagg
atagaaggacaatacctagtcacagcatcgtacgataatactgcgaaaatatggtcaaat
aaaacctggcaaccacttaaaacgttaccaggtcacgatgggaaagttatgtccgtcgat
atttctcccgatcataaattcatcgggactagttcgtacgatcgaacgttcaaattgtgg
gctccagaaaacatgtaa
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