Bombus terrestris (buff-tailed bumblebee): 100645250
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Entry
100645250 CDS
T04364
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100645250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bter03021
]
100645250
03019 Messenger RNA biogenesis [BR:
bter03019
]
100645250
Transcription machinery [BR:
bter03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100645250
RNA polymerase I system
100645250
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100645250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
CTD
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
100645250
NCBI-ProteinID:
XP_003397304
UniProt:
A0A9B0C216
LinkDB
All DBs
Position
8:complement(8091325..8096786)
Genome browser
AA seq
1133 aa
AA seq
DB search
MSDSEASNLSDNESDRGVGGSESDQEENHSVKSAAGSDGGNAGERSRSVSRSRSPSRSQS
RSPRRWRSRSRSASGSEDGREDEAEEARSGDEEMVEPEEEPEGEDLEGSSEYDEEEEEED
DDRPRRKRRKDKYRDFIIDEAEVDDEVEDDDEWEEGAQEIGIVGNEVDELGPTAREIEGR
RRGTNLWDSQKEDEIEEYLRKKYADESLATRHFGDGGEEMSDEITQQTLLPGVKDPNLWM
VKCRIGEEKATVLLLMRKFITYQYSNEPLQIKSIVAPEGVKGYIYIEAYKQPHVKAAIEN
VGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQN
QVHLKLLPRIDYTRPRGALRTAQSESEALKRKRKRRPAAKPFDPEAIRAIGGEVTSDGDF
LIFEGNRYSRKGFLYKNFTTSAIIAEGVKPTLSELERFEEAPEGVELDLSGTPGTGAGNK
EDATVTHSFSTGDNVEVCEGELINLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKY
FTMGDHVKVVAGRYEGDTGLIVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSL
GQFQWGDLVQLDAQTVGVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQQ
NTIQRKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKS
NMSSMSPVAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGP
YKGNVGIVKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQT
PMYARDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTN
DFDGYSMEEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPT
GYVATPSPTGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGANLDTNVGSGIIG
GADWHTTDIEVRIRDSHQDPALAGQQGVVRGISGGMCAIFLPVEDRVVNLICEDLEPVVP
SRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLNKDEVKMLHLRFLCKMKASNT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagaggcgagcaatctatcagacaatgaaagcgatcgaggagttggcggc
agcgaaagtgaccaagaagaaaaccattcagtgaaatccgcagctggcagcgatggtgga
aacgctggtgaaagatcacgtagcgtctctcgcagtagaagtccgtccaggtcgcaatcg
agaagtccacgcaggtggcgatcacgatctcgatcagccagcggttcggaggatggtaga
gaagatgaagcagaggaagcaagatctggtgatgaagagatggtggagcctgaggaagaa
cctgaaggagaagatttggagggaagtagcgaatatgacgaagaagaagaagaggaggat
gatgatagacctcgtaggaaaagaagaaaagacaaatatcgtgattttatcatagacgaa
gctgaagtagatgatgaggttgaagatgatgatgaatgggaagaaggtgcccaagaaatt
ggtatcgttggaaatgaagtggacgagttaggtcctacagccagagaaattgaaggcagg
cgtagaggaactaatctttgggattctcaaaaggaagatgaaatagaagaatatcttaga
aaaaagtatgcagatgaatctcttgctactcggcattttggtgatggtggtgaagaaatg
agtgatgaaatcacacaacaaactttactgccaggtgtgaaagatccaaatctgtggatg
gtaaaatgccgtattggagaagaaaaagcaacagtactattgttaatgcgaaaatttata
acataccaatattcaaatgaacctcttcaaataaaatctattgttgcacctgaaggagta
aagggatatatttacatagaagcgtacaaacaaccacacgtaaaggcagccatcgaaaac
gtaggaaatctaagaatgggtatctggaaacaacagatggtaccaatcaaagagatgact
gatgtgttacgtgtagttaaagaacagacaggcttaaaagcgaaacaatgggttagacta
aaaagaggcatttataaagatgacatagctcaagttgactatgttgacttggcacagaat
caggttcatttgaaattgttgcccagaattgattatactagaccacgtggagctttgaga
acagcacaaagcgaatctgaagccttaaaacgcaagagaaaaagaagaccagcagccaaa
ccgtttgaccccgaagcaattcgtgctatcggaggagaagtcactagcgatggtgacttc
ttaattttcgaaggaaatagatatagtagaaaaggatttttgtataaaaattttactaca
agtgcgattatcgcagaaggtgtgaaaccaacattatctgaactagaaaggttcgaggag
gctcccgagggtgtcgaattagatttaagtggaactccaggaactggtgcgggtaataaa
gaagatgcgacggtgacccattctttcagtacaggagacaatgtcgaagtatgcgaggga
gaattgattaacttgcaaggaaaaattgtctctatagatggaaacatgattatggttatg
ccaaaacatgaggagcttagagaagccttagaatttcaagcgtctgaattacgaaaatat
ttcactatgggcgaccacgttaaggttgttgcaggaagatatgagggtgataccggttta
atagttcgagtcgaacaaaatagagtagttttgttttctgatctttcaatgcacgaatta
gaagtgcttccaagagatctacaactttgttcggatatggcaactggagtagacagttta
ggtcaattccaatggggtgatttagtacagctggacgcacaaaccgtgggtgtaattgtt
cgattggagcgtgaaaactttcacgtactctcaatgcatggcaaggttatagaagctaga
cctcagggactcacaaagagacgtgagaatagaaatgcagtggcgttagactcacaacag
aacactatacaaaggaaagacattgtcaaagtagtagatggtccacatgctggaaggggc
ggagaaataaaacatttgtacagaagctttgcatttttgcattcgcgaatgttcgttgac
aacggtggaattttcgtttgcaaaacgagacatttgcaactttctggtggaaataagtcc
aatatgtcgtctatgtcacctgtggcaggattcatgtcgccaagaatagcttcgccaatg
catcctagtggaggtggcttcggaagaggtggcggaggtggaagaggcagaggtcgtggt
ggtggagccagacgtgacagagaattgataggaaccactatcaaaataactggcgggccg
tataagggaaatgttggaatagtaaaagacgctacagagacaactgctcgtgtagaatta
cattccacctgtcagaccatctccgtggacagatctcacattgcgaacgttgctgtactc
acaaaggatggtggtttcagcagctacaacaggacaccagcatatggtggtggacagaca
cccatgtatgctagagatggatcgaaaacacccatgcatggctctcaaacaccaatgtac
gaaaatggttctcgtacacctcattatggctcaatgacgccatcccacgatggttcacgc
acaccgggacaatctggtgcctgggatccagctgttaccaatactcctgccagaacgaac
gacttcgatggatacagtatggaagaaggcggatctccaggttatgcgccaggttatcct
tcaactggaccattcacgccacaaacgcctggcacgatgtacggctcagagcagagcttc
agttcatatcaaccgagtcctagcccggcaggaagtgccactgcaagtccaagtcctaca
ggatacgttgcaactccctcaccaactggtactggatatactactagtccgcatggagcc
tttgccacgccttcacccatgggttacagtcctatgactccaggagttgcaggtagccca
tacaatccacagacaccaggtgccaatctagatacaaatgtcggttctggaatcattgga
ggagccgattggcacacaacagatattgaagttcgaattcgtgactctcatcaagatcct
gcgttagctggccagcaaggtgttgttcggggaatatccggtggcatgtgtgcgatcttc
ctacctgtagaagacagagtagtgaatttgatttgcgaggatttagaaccggtagttcca
tcacgaggtgaccgagtcaaagtgattatcggagaagacagagaagcagtaggcactctg
ctatccatagataaccaagaaggtgtagtgaaattaaacaaggacgaagtgaaaatgttg
cacttgcggtttttgtgcaagatgaaggcatcgaatacataa
DBGET
integrated database retrieval system
