Bombus terrestris (buff-tailed bumblebee): 100645517
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Entry
100645517 CDS
T04364
Name
(RefSeq) cholesterol transporter ABCA5 isoform X2
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100645517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bter02000
]
100645517
Transporters [BR:
bter02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100645517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
SMC_N
RsgA_GTPase
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100645517
NCBI-ProteinID:
XP_003394468
UniProt:
A0A9B0BM23
LinkDB
All DBs
Position
3:complement(8844630..8880032)
Genome browser
AA seq
1714 aa
AA seq
DB search
MDMCGVYLSQLRAMLVRNILLKKREKRKTTAEIFLPLCTLGVLIVVKVLPPNPNYPAMTT
QRQEGGIFETFNGYRNNTIAVVPNSTETLTFLNSMNALWASMWDYPGKLPLNFMVFDTKD
DLQAAYWRDPYSVPLAVIFEDSQPISQRLSYEIRTNPSYTNPPSPTELYSAPVTCRKDTS
HWLGGVLSMETGGSCPANNYLHSGFLALQMIMDITKIRLDTGNTDVTVPDVKLEMFPKEA
FTANWMLALRVVIPLFMVLSLSQFVTYLLILIVGEKEKKIKEGMKIMGLKDSIFWLSWFI
IYSVFVLLLSAVAVILLFTLQMFQHTHFLPIFLLVVLYSFSIIMFAFMITPFFDTSRTAG
VLGNFAVTIMSLMYFIQVFVNDSSSVPFWLVSLLSPTGVALAMDKALVLDLQGEGVNFDN
LWSGPGIPFGGSLIMMTLDIILYACLAYYFDCVIPSEYGTKRTPWFCFTPEFWCQRKAPR
VPSSNGESNSFIPGEETNRDVEPVVREMKGREAIRIVDLYKSYQKCRKPEIKAVNGINLT
IYEGQITAILGHNGAGKTSLFNILTGLTAPTAGTALIFGYDVRDSNDMQMIRSMTGVCPQ
HDILFDLLTPREHLEFFAAVRGIPKSMIEHEVKKTLKDIDLTEKANTFAKYLSGGQKRKL
SVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRHGKVILLTTHFMDEADILADRK
AVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAITRLVTCHVSKAEKARRHGRE
LSFILPHNSVENFAPLFSAIEHEIKTRSSRLGISSYGVSMTTLEEVFLHLEKDEGPEYTM
DNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQNDGQAKEAGDLPDGVHSDRNPPV
LGLGLDPIKVRPNFLQTLYAMLRLRILRLFRNIQLLYFTIFAPLLLVVVGLHLNSIETVE
IKMQSLTLNTDTYGNETKLLYANNTDHDITNLIDGINQDVKYIEEYYGNFANLLKIAPHM
SAFNINEYSLSRINLTVAYNDTMQHSLPILINLLSNTYYRLLSNENNLKPIEVKTHPFQQ
TSQPQGFNIGTASTALFIGMNFVLLPITLVVDVVYDREIKAKNQLRVNGLSFSMYFLTYF
IVLVGLMSFICLCILGIIFLFDVPSLQEVPALITLAGLFMLYCPSSILFSTCLSYIFDKM
DSAQSILPNIATFIGLIPFILVTILDMLGLSGTAAFVLHVIFSLLNTLYVPYAAVYYVER
VHLMCSINAACHHLTMSDYLTTEIILMAFGVLLHCPVWFFVLLLLDIKKSGGNVSDVLKY
FLRNGGSIGEEIMENSDIGEHEDADVKAEKQKVFNLITSSAVQEPPVVLVQNLRKEYRQQ
DTGSCSCCSKQDEEASQIQRKVAVRNLSLAVEPGEVFGLLGHNGAGKTTTMKIIIAEEAA
TRGRVQIGGHNINSSMTEAFKQMGYCPQHDAQWKNITVREHLESYAAIRGVPWSDIGRIV
DLYLTGLQIHEHADKQAHECSGGTRRKLSFAMAMIGGPKVVLMDEPSAGMDPRSKRFLWD
TILASFQGGRGAILTTHSMEEADALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTLEMKL
LGGDCTPTTPSGDRITILKEFVSSLFPDATLEESFADRLVFAVPQHAVTSLAECFTQLEK
AKLELDIEEYSFSQTTLEQVFLKFSHYDESNSGE
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtgcggggtctacttgtctcagctgcgagcgatgctcgtgaggaatatcctg
ttgaagaagcgcgaaaagcggaagactacagcggagattttcctccccctttgcacctta
ggtgtattgatagtggtaaaagttttgccaccgaatccaaactatcccgcaatgacgacg
cagaggcaggagggtggtatattcgagacgttcaatggctacaggaacaacacaatagcc
gttgttccaaactcaacagaaactttgacttttttaaattcgatgaatgccctgtgggca
tcaatgtgggattaccctggcaaacttcccttaaatttcatggtgttcgatacaaaggat
gatctgcaagcagcgtattggagagacccatatagcgtacctttagcagtaatcttcgag
gattctcaacccatatctcagcgtctctcgtacgagataagaactaacccctcatatacg
aatccaccttcgccaactgaattgtattccgccccagttacttgccgaaaggatacgagc
cattggctgggaggtgtattgtcgatggagactggtggatcatgtcctgcgaataactat
ttgcactcaggtttcctagcattacaaatgataatggatatcacaaagataagactagac
acagggaatacagatgtaactgtaccggatgttaagctagaaatgttccctaaagaagct
ttcaccgcaaactggatgctggccttgagagttgttatacctctttttatggtcctctct
ctttcacaattcgtcacttatcttctgatcctaatagtcggcgaaaaggagaaaaagatc
aaggaaggaatgaagataatgggcctaaaggattcgattttctggttatcatggttcatt
atctacagcgtttttgtcttattactctctgccgtcgcagtaatactacttttcacatta
caaatgtttcaacacacacactttttaccgatattccttttagtagtgctctacagtttc
tccataatcatgttcgcttttatgataacacctttcttcgacacgtcacgaactgccggt
gtactaggcaattttgcagtcacgataatgagtttgatgtattttatccaagtctttgtg
aatgactccagttcagttccgttttggttagtctctcttcttagtccaacaggcgttgct
ttggctatggataaggctcttgtattagatctacaaggagaaggagttaactttgacaat
ctttggtcaggtcctggtataccatttgggggaagtcttattatgatgactttagacata
attctctatgcttgcttagcttattattttgactgcgtcattccaagtgaatacgggacg
aagagaactccttggttttgctttacgcctgagttttggtgtcaaagaaaagctccaagg
gtaccatcatcgaatggtgaatcaaattcttttattcctggtgaagagactaatcgtgac
gttgaacctgtggtgcgcgagatgaagggtcgtgaagcgattagaatagtcgatctttac
aagtcctaccaaaaatgtcgtaagccagaaattaaagccgtaaatggcatcaatttaacg
atttacgagggacaaatcacggcgatacttggacacaacggagctggaaaaacaagtctc
ttcaatattttaactggcctgaccgcacctactgctggcactgccttgatatttggttat
gatgttcgagattccaatgatatgcagatgattagaagcatgactggcgtctgtccacaa
catgatatcctttttgatcttctcacacctcgcgaacaccttgaatttttcgctgctgta
cgtggtatcccaaaatcgatgattgaacatgaggtgaagaaaactttaaaagacatcgat
ttaactgagaaagcaaatacttttgcgaaatacttgagtggaggacaaaaaaggaaattg
tctgtaggtatcgccattatcggtgatccgaagattattatcctcgatgaacctacagct
ggggttgatccctactctaggagacagatgtggtctttcttacaatctagacgtcatgga
aaagtgattctattgactactcattttatggatgaggcggatatattagcagataggaaa
gcagttattagtaaaggaaagctgagatgctgtggcagttctttgttcttaaaaaataaa
tttggtattggatatcacttaacgttagtacttgaaggaaatgcaagagaacacgccatt
accagattagtaacgtgtcatgtctcaaaagcagaaaaagcaagacgtcatgggcgtgaa
ttgagctttattttacctcataattcagtagaaaacttcgcaccacttttctcagctata
gagcacgaaattaaaacccgatcgagtagattaggtattagcagctatggagtatcaatg
accactttagaagaagtatttctgcatttagaaaaggatgaaggtcctgaatacacaatg
gataatttatcaaaaaagatggtgcgcaatcgtgcattaagcagatctttatcgttgcaa
tctaagagtacttcttatcagagtttgcagaacgaaggtgtcactgttcagaatgatggt
caagcgaaagaggcaggagatttgccggatggcgtccatagtgatagaaatcctcctgtt
cttggccttggactagaccccataaaagttcggcctaatttcctccaaaccttgtacgct
atgcttcgcctaaggatacttagactcttcaggaacattcagttattgtacttcactatc
ttcgcgcctcttcttctagtagtcgttggcctccatttaaatagcattgaaacagttgaa
atcaaaatgcaatctcttacattgaatactgatacttatggaaatgagactaaacttttg
tacgcgaataataccgaccatgatatcacaaatttaatcgatggaataaatcaagatgtg
aagtacattgaagagtattacgggaattttgcaaatttgttaaaaatcgcaccgcatatg
tctgctttcaatatcaatgaatatagtctgtccaggatcaatttgactgtcgcatataat
gataccatgcaacattccctaccaattttaataaacttgttatcaaacacttattacaga
ttactctcaaatgaaaacaatttaaaaccgattgaagttaagacacatcctttccaacaa
acttctcagccacagggatttaatattggcacagcgagtaccgcactgtttattggaatg
aattttgtattgttgccaataactttagttgtggacgtggtctatgatcgtgaaataaaa
gcgaagaatcagcttcgtgtgaatggtctgtcattttcgatgtactttctgacgtacttt
attgtacttgtcggcctgatgtctttcatctgtttatgtattcttggcatcatatttctc
tttgacgtgccttcgcttcaagaagtaccagcactcatcaccctagccggtcttttcatg
ctttattgcccatcatccattctattctctacgtgtttgagttacatctttgacaagatg
gattccgctcaaagcattttgcccaatattgcaactttcattggacttataccgtttata
ctagtcacaattcttgacatgctgggtcttagtggaacagcagcgtttgttttacacgta
attttttctctactgaacacattgtacgtaccatatgctgcagtgtattacgtagaaaga
gtacatctaatgtgctctatcaacgctgcttgccatcatctgactatgtctgattattta
accacggagatcattctaatggcctttggcgtgcttctgcattgtccggtgtggttcttc
gtgcttttactattggacattaaaaagagtggtggcaatgttagtgatgtattgaagtat
ttcctgcgcaatggcggttcgattggtgaagaaataatggagaactctgacattggagaa
catgaagatgcagacgttaaagcagaaaaacaaaaagtttttaatctcattacttcatct
gccgttcaagagccacctgtagttctagtacagaacttgagaaaggagtatcgacagcag
gatacaggttcatgtagttgctgttcgaaacaagatgaagaagctagccaaatacaacga
aaagttgctgtaagaaatctttcgttagcggttgagccaggagaagtgtttggtttgctg
ggccacaatggtgctggaaaaacgacgacaatgaagattatcatagctgaagaagcggcc
actcgaggcagagtacagatcggtggtcataatattaattcaagtatgacagaagctttc
aaacaaatggggtactgtcctcaacatgatgctcaatggaagaatattaccgttagggaa
catttagaatcttacgccgcgattcgtggtgtaccatggagtgatattggcagaatcgta
gatttatacctcaccggtttgcaaattcatgaacacgccgataaacaagctcatgagtgt
tcgggtggaactagaagaaaacttagttttgccatggcaatgatcggaggtccgaaagtt
gttctaatggacgaacctagtgcaggaatggatcctaggtcaaagagatttttatgggat
acaatccttgctagtttccagggtggtagaggagcaattcttaccactcattcaatggag
gaagctgatgctctttgttctagagtgggtataatggtaaaaggagagttaagatgtatt
ggttctactcaacatctgaagaatttatatggtgcaggctataccctcgaaatgaaactt
ttaggcggtgattgtacaccaacgacaccgtccggtgataggattacgattctgaaagaa
tttgtttccagtctttttccagatgcaactctcgaagaaagttttgccgacagattagtt
tttgctgttccccaacatgcagttacctcgctggccgagtgttttacgcagttggagaaa
gccaagctcgagctggatatcgaagagtatagcttcagtcaaaccactttggaacaagtt
ttccttaaattttcccactatgacgaatctaactcaggagaatga
DBGET
integrated database retrieval system
