KEGG   Bombus terrestris (buff-tailed bumblebee): 100645586
Entry
100645586         CDS       T04364                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013  Nucleocytoplasmic transport
bter03015  mRNA surveillance pathway
bter03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100645586
  09122 Translation
   03013 Nucleocytoplasmic transport
    100645586
   03015 mRNA surveillance pathway
    100645586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bter03019]
    100645586
   03041 Spliceosome [BR:bter03041]
    100645586
Messenger RNA biogenesis [BR:bter03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100645586
    TREX complex
     100645586
Spliceosome [BR:bter03041]
 Complex C
  Other components
   EJC/TREX
    100645586
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100645586
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 100645586
NCBI-ProteinID: XP_003394070
UniProt: A0A9B0C8B6
LinkDB
Position
2:18939769..18943723
AA seq 249 aa
MKMVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARRTQRVGGGVMRGRNRGG
ITRNSLPYTRGDVNSAWKHDMFDGVKKVGRSSIGSAGTTKLLVSNLDFGVSDSDIQELFS
EFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSEIPV
TSIRGGPRLSGSNFTQRPQSRFRGSRGTGSVRGRGTGRRGGRGGSRQVTKTPTAEELDAE
LEAYVKEVK
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaagatggttgataaaatagacatgagtctcgacgatattatcaagcaaaataaagga
acaagaccacgcggcggcagtagcagacgtggaagaggtgccggtaattcacctcgtaga
ggagcacggagaacgcaaagagttggtggtggcgtcatgcggggacgcaatcgtggtggc
attacaagaaattctcttccatacacaaggggcgatgtaaacagtgcttggaaacacgac
atgtttgatggagtaaaaaaggttggccgaagttcaataggtagcgcagggacaaccaag
ctccttgtatcgaatctagattttggagtatccgattcagacattcaggaattatttagt
gaatttggccccttaaagtcagcagcagtacattacgatagatcaggccgatcattagga
tctgcagatgttatatttgaaagaagagcagatgctattaaagcaatgaaacaatataat
ggcgtacccttagatggtcgtgaaatgaacatacaagttgctacctctgaaataccagtc
acgtctatccgaggaggaccgagacttagcggcagtaattttacacagagacctcagtcc
cgctttaggggtagccgtggaacaggatccgtcagaggtcgtggaactggtcgacgtggt
ggcagaggcggcagccggcaagtaacgaaaactcctaccgctgaagaattagatgcagaa
ctggaagcttatgtgaaagaagtaaagtaa

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