Bombus terrestris (buff-tailed bumblebee): 100645920
Help
Entry
100645920 CDS
T04364
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100645920
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100645920
3'-5' decay
Other 3'-5' decay factors
100645920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD-helicase
ResIII
AAA_22
Mg_chelatase
AAA_7
PhoH
AAA_5
PAM2
AAA_16
Motif
Other DBs
NCBI-GeneID:
100645920
NCBI-ProteinID:
XP_003399561
UniProt:
A0A9B0C1A8
LinkDB
All DBs
Position
12:4518961..4524148
Genome browser
AA seq
911 aa
AA seq
DB search
MVDHLYRMNGEVKAHFPSGFAEKVQHDWVKSQNPETIITCKDTDGVLIFSNKSLCCRSTI
NNVVFCWKFEVVTNGKQLQRIALTLDQNRTNFSLKSVIHRDINIGITNGQEWYNSELDNS
NVNENVLKEEHYVVKICFNANKYGTYRQNIIFYFGEYPVIIQKICMDSMPKKDFSRIHEA
TNYQFSQNPNIWNNKTCQICRFDSPFVSMIDPEEDILSRMYSYPNRSNFFLTQESLTDDR
LTPENYRGRLHELITVEELARHEQIARYNETTYMHFLSYYALTSSDGSTTVKYAPPGELF
AQLPLSRSISEDTKCGRLFLRGCNRVLFMCLTQLSNVIYEAHIEDKCTHTVYIRLSKECV
HALNLAANTDLHVQVQFLLNRLPFCEWHRSVDSLPDIGLVFLNNAHKNMEESSFPNLLDI
NESRVEVSLLNVEQEKALAVITASTNISMPPILLLGPFGTGKTFTIAQALRFLLTKSSEY
KILLCTHSNSAADLYVKEFFNGWYKCENNPRLKPVRIYYKGRSRNTVHPVVQEYSLMKQN
GTFRNPTEEDLRDCGLVVTTLTTSSSLTSLNLSFTHIVIDEAAQALECEVLIPLALATPQ
TRLVLAGDQMQLAPEIYSDLASERGLGISLLERIHEMYPQTHPCRIHLHQNYRAHRDIIK
FTSEMFYDGIVKSASQKDHIDIIQHPTLKPLTFYAVEGVEIQDIHSTGYANMGEVFELVN
RVQDLRNNWPTDRWGIYGEKSIGVLVYYAEQVQRIRVELRERRMTDVSVERVLNAQGKQF
TAVFISTVRTRHCCRYSAERNVKDYGFLTNPRLLNTAMTRAKYLVAVVGDPVALFTIGSC
RRLWQRYLEISDLHGIDRETLNHLLSLVPKLSCTPLNPLAREFVPRNSVCLVEYVSVPVL
YPVFHYPFYSA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcacttgtatcgaatgaacggagaggttaaagcccactttccttccggcttc
gccgagaaggtgcagcacgactgggtgaagtcgcagaatcctgagacgataataacgtgc
aaggatacggacggtgtgttaattttctcgaataagagtctctgctgccgttcgaccatt
aacaatgtagttttctgttggaaatttgaggtcgtgacgaacggtaaacagttacaaaga
atagcactaaccttggatcagaatcgcacaaatttttcattgaaatctgttatacatcgt
gatattaatattggaattacaaatggccaagaatggtacaattcagagttggacaattca
aatgtaaacgaaaatgtactaaaggaagagcattatgtagtcaaaatttgctttaatgcc
aataaatatggcacgtatcgccagaatatcattttttactttggagagtatccagtgata
attcaaaagatttgcatggattctatgccaaaaaaagacttttccaggattcacgaagcg
accaattatcaattctcacagaatccaaacatatggaataataaaacatgccagatttgc
cggtttgattcaccttttgtatcaatgatagacccagaggaggacatattgtccaggatg
tattcatatccaaatagaagcaattttttcttgactcaagaatctctcacggacgaccgt
ttaactccagaaaattatagaggtcgtcttcacgagttaatcacagtagaggagctagct
cgacacgaacagatagctagatataatgagaccacctacatgcattttcttagttactac
gctttgacttctagtgatggatccaccactgtcaaatatgcaccaccgggtgaactcttt
gctcagctgccgctaagccgcagtatctcagaagatacgaaatgcggcaggctgttcctg
agaggttgcaatagagtactcttcatgtgcttaacacaattgtcgaacgtaatatacgaa
gcgcacatagaggataagtgcacgcacacagtgtacattagattgtcgaaagagtgtgtg
cacgcgttaaatttggcagccaatacggatttacacgtgcaagttcaatttctattgaac
cggttgcccttctgcgagtggcacaggagcgtggatagtttgcccgacattggcctagta
tttctaaacaatgctcacaaaaatatggaagaaagtagttttccaaatttgttagatata
aacgagagcagagtcgaagtttccttgttgaacgtagaacaagaaaaggcattggctgta
ataacagcctctactaatatctccatgccaccgatcttgctactaggaccattcggaacc
gggaaaacgtttactattgcccaggcattacgatttttgttgacaaagagctcagaatat
aaaatcctactctgcacacacagcaacagcgcggcagatctttatgtcaaagaattcttc
aacggttggtataaatgtgaaaataatccacgattgaagccagtcagaatctattacaaa
ggtagatccaggaacacggtacatccagtggttcaggagtacagtttgatgaaacagaac
ggtaccttccgcaatccgaccgaggaagaccttagagactgtggtttggtcgtgaccact
ttgaccacgtctagctctctaaccagcttaaatctatcgttcacgcatatagtgatcgat
gaggctgctcaagcattagagtgcgaagtcctcatacctttagccttagctaccccacaa
actcgcttagttttggccggcgatcagatgcaacttgcgccagaaatatatagtgacctg
gctagtgaacggggtctgggtataagtttattggaaaggatccacgaaatgtacccacaa
actcatccatgcaggattcatctgcatcagaattatcgtgctcacagggacatcattaaa
tttacctcggagatgttctacgacggaatcgtcaagtctgctagccaaaaagaccacata
gacataatacagcaccccacgttaaagcctttaaccttttatgctgttgaaggcgtggaa
atacaggacatccattcgacaggctacgcgaacatgggcgaagtattcgaactggttaac
cgcgtgcaggacctgcgtaacaactggccaacagatcgttggggtatctacggcgagaag
tcaatcggtgtgctcgtctattacgcggagcaggtgcagaggattcgtgtggaactgagg
gaacgcaggatgacggacgtgtcggtggagagagtgttaaacgctcaggggaagcagttc
accgctgtgtttatcagcacggtgcgtaccaggcactgctgtcgatactccgcggagagg
aacgtgaaggactatggcttcttgaccaatcccagacttctgaacactgctatgacacgg
gctaaatatctggtagcagtggtgggcgatcctgttgctctgttcaccattggttcctgc
aggaggctctggcagagatacctggagatatctgatttacacggtatcgacagggaaact
ttgaaccatcttttgagcctggtacccaagctttcgtgtacaccgctgaacccattagcg
agggagtttgtacccagaaatagcgtttgtctggtggagtacgtgtcggttccagtgctg
tatccggtgttccattatcccttttactctgcgtaa
DBGET
integrated database retrieval system
