Bombus terrestris (buff-tailed bumblebee): 100646121
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Entry
100646121 CDS
T04364
Name
(RefSeq) nuclear pore complex protein DDB_G0274915 isoform X1
KO
K18716
nucleoporin NUP42
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100646121
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100646121
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100646121
NCBI-ProteinID:
XP_003399404
UniProt:
A0A9B0C0R6
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Position
11:18648101..18650721
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AA seq
626 aa
AA seq
DB search
MVVCKYYRQGNCRFGQYCQFEHINTFGGNNKVDSYNEDEYIAVLVAKEMLNAERGRQWLL
SCFAPFKDKPCIPGMEDLSPEEVRWEMYQAQNNGMVDQAKLHFQQLCTDMKAKREAFKNP
TRETLTKLKEILGTGHKNARNDNTSGKSSSFTFATPQLGLPSSTPSSNVFGNKTFGTQSN
PFSGGFPPTSNTSIFGRTPTTSNSVFGSTPTFGSNLGVFGGGTSTNTVFGGITNTSTFNA
GQNTQTFGSSGSIFGGGASQPVFGQPSIFGTGNPVNNVFARHETSQAPISVFNSGATSSP
SLFSGTSSQSNASVFAGAKTSTANLFGGSSNLQTTNSIFGSTPSTGTFSSGIFSQSETPA
FGGAPVFGASATFGNNPSSIFGEKPAFGNSGSIFGGSNTTTPAFSSAQPTNAFGVTTSTS
SVNLFGNAQGTTPSMSTSSTSPFSATPSTTTSPFATATSQFETTSTAVFSKPTFGMATET
AGGTFATTATSSSTPFGTTNTGVTFGTPSTTTSPFTSTIFSDITSSPFSSTSVTSTATTT
NSFTPQQQQITSPFGTFAQNQTSSTATSTHEPFGKSTFGVTLTATIIDDNIYSLDNQLTD
DEKNMYMAEKFIFGKIPLKPPTKDIR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatactatcgacaaggaaattgtcgatttggacaatattgtcaattc
gaacatataaatacttttggaggtaataacaaagttgactcttacaatgaggatgaatat
attgccgtgttggttgcaaaagaaatgctcaatgcagaaagaggaagacaatggttacta
tcatgttttgcaccatttaaggacaaaccgtgtattcctggcatggaagatttgtctccg
gaagaagttcgatgggagatgtaccaagctcaaaataatgggatggtagatcaggcaaaa
ttacatttccaacaactgtgtacagatatgaaggcaaaaagagaagctttcaagaatcct
acccgtgaaacactaactaagcttaaagagattttaggtacaggacataagaatgccagg
aatgataatacatctgggaaatcctctagttttacttttgcaactcctcaacttggactt
ccaagcagtactccatcctccaatgtatttggaaacaagacatttggaactcagagcaat
ccattcagcggtggtttcccgcccaccagtaatacatcaatctttgggagaacacctaca
acttcaaattctgtatttggtagtacaccaacttttggcagtaatttaggagtgtttggt
ggtggtaccagcactaatactgtatttggtgggattacaaacacttctacatttaatgca
ggacaaaacacgcagacttttgggtcgtccggctcgatttttggcggtggagcttcccaa
cccgttttcgggcagcctagcatattcggaaccggcaatccagtgaacaatgttttcgcc
aggcatgaaacgtcccaggcgcccatatcagtattcaatagcggagcaacatcttctccc
tctttattcagtggcacttcttctcaatctaatgcttctgtatttgccggagctaaaact
tctactgctaatctgtttggcggctcttcaaatttgcagacgactaactccatcttcgga
tcaactccatccaccggaaccttcagttcaggcatattctcgcagtctgaaacacctgca
tttgggggagcaccagtatttggtgcttcagcaacctttggaaacaatcccagttcgata
tttggcgagaaaccggcatttggaaattctggtagtattttcggcggatccaataccacg
acacctgccttcagttcggcacagcctacaaacgcttttggcgttaccacttctacatct
tccgtaaatctatttggaaatgctcagggtaccacaccctctatgtccacttccagtact
tcgccatttagcgcaacaccttcaacaactacgagtcctttcgctaccgcaacctcgcaa
tttgaaaccaccagtacggcagtcttctcgaagcctacgtttgggatggctacggaaact
gcgggtggcacttttgctactacagctacttcctctagcacaccgtttggtactacaaat
accggagttacttttggtacacctagtaccaccacttctcctttcacatcgacgatattt
agcgatataacgagctcaccatttagttctacgagcgttacgtctacagctacaaccaca
aattcgtttacaccgcagcaacaacaaattacttccccatttggtacttttgctcaaaat
caaacttctagtactgctacgtctacgcacgaaccgtttggaaaatcgacattcggagta
acgctgacggcaaccattattgacgacaacatttattcgttagacaatcaactaacagac
gacgagaagaacatgtacatggctgagaaatttatttttggaaagattccactgaagccg
cctaccaaagacattagataa
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