Bombus terrestris (buff-tailed bumblebee): 100646219
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Entry
100646219 CDS
T04364
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100646219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100646219
03012 Translation factors [BR:
bter03012
]
100646219
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100646219
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100646219
Translation factors [BR:
bter03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100646219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
NPHP3_N
AAA_19
PhoH
NB-ARC
NACHT
ABC_tran
RsgA_GTPase
Sigma54_activat
AAA_16
TsaE
SRP54
Motif
Other DBs
NCBI-GeneID:
100646219
NCBI-ProteinID:
XP_003394474
UniProt:
A0A9B0BDE2
LinkDB
All DBs
Position
3:complement(9878893..9883539)
Genome browser
AA seq
977 aa
AA seq
DB search
MFHPYRLFSAQRMYSRRRHGDRGESSQSGGSHFERDSRGRGRGGGHPPWLKGKEIGLYYR
DKAREKAKKKETRVIKLPEHLQEKIGHMLNNSKGYYEKLYNNAYTEDTYGVLENKYVHIR
DSQFKRKFINMVSGNMQGNLARALLVKSKLEKDIELDKKLLNEHRTLQLTQEYENMKQFR
LKLPSHHKRSKILELIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGSTVRIICTQP
RRISAISVAERVAAERGERLGKSVGFQIRLEKVLPRDRGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERFSSYYNDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPPSAAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYVRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDSGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVV
DCGKMKFGKFDLQKNIQTLEPEWVSLANAKQRRGRAGRVKAGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAIDLSLDLLRTLNALDDEEQLT
PLGYHLAQLPVDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPFGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLCQMK
FMDSENPADINANRNSSNITLVKAVVCAALYPNIAIIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSASILLFTAPKVSIRKEKGNYFISLAN
SQIFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSVEGDVLNAIIELVSQKDEELG
FSNSDIQNCEDDMHDTV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttccatccttaccgattattttcagcacaaagaatgtattcgagacgtagacatgga
gatagaggtgaaagttctcagtcaggagggtcacattttgaacgtgacagccgtggacga
ggcagaggaggaggacatccaccttggttgaaaggcaaagaaatagggctttattataga
gataaggctagagaaaaggccaagaaaaaggaaactcgagttattaagttacctgaacat
cttcaagaaaaaattggacacatgttaaacaattctaaaggatattatgaaaaattatat
aacaatgcatacactgaggatacgtatggtgtgttagaaaataaatatgtgcacattcgt
gactcccaatttaaaagaaaattcataaacatggtatctggtaatatgcaaggaaatctt
gccagagctttgctggttaaatcaaaattagaaaaagatattgaactagataaaaaatta
ttaaatgaacatagaacattgcaattaacgcaggagtatgaaaacatgaaacaattcaga
ttaaagttaccatctcaccataaaagatcaaaaatattagaattgattaaggaaaatcag
gttattgtaataagtggagaaactggttgtggaaaaacaacacaggttgctcagtatata
ttggatgaccaaatagaacaagaaaatggtagcactgtgcgaattatatgtactcaacct
aggaggatatcagctatatctgttgctgagagagttgcagccgagagaggagagaggctt
ggtaaatccgttggttttcaaatccgacttgaaaaagtattaccaagagatagaggcagt
ataacattttgtactactggaatgttattgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctaccgaaagtgacttcatc
cttgctttactgaaactaattatccctaaaaggcccgatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattataatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacattctatcctttacagaa
tatcaatttcccccatcagctgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaggaacaacgaaaaagggacgagtttcatgatgtgctatatccttatgtacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattgtctcttgatcttatagaacaattagttaggtacatttgtaaaactaaagat
tctggagctattttagtttttcttcctggtatgatggatataataaagctacataaaatt
atgctagaaaatagacagtatccacaaaatcagtatgttatttatcctcttcattctcgt
atgccaactgtcgatcagaagctcgtatttaaaacaccacctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttgtt
gattgcggaaaaatgaaatttggtaaattcgatctccaaaaaaatattcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaaa
gctggtgtctgttaccatttgtactcaaaagctagagaaatggcactagatcagtatcct
ttacctgaaatgttaaggacgcgtttagaggaagttattttacaaataaaaatgttacaa
ttgggaaaagctagaactttcttagcaagtgttatggatccgccaaatatgaaagctata
gatctatctttggatttactccgaactcttaacgcgttggatgacgaggaacaattgact
cctttagggtatcatttggctcaattacctgtagatccacgaacagggaaaatgatcata
tgggcatcattattttcgtgcgtagaaccagtttttgcaatcgcggcgagtcttagtttt
aaagatgctttttactgtccatttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcatatcgcgttatctgaagcattaagaagatttgaa
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctcttttagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtgtcaaatgaaa
tttatggattcagaaaatcccgctgacattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgtgctgcattgtatcctaatattgctattataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggtagcgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacatattttacaaagcag
ctctcgacagcgatatatttgcatgatactacatgcgttagcgcgtcaattttattattt
actgctccaaaagtgtctataagaaaagaaaaaggaaactattttatcagcttagcaaac
agtcaaatatttgcttgcgatttgcaaagtgcacaacttattcagaaattacaagaacaa
ttcaataatatgttagagtataaaataacacatccgggaacagtatgctggaatagcgtt
gaaggcgatgtattaaatgctatcatagaactggtttctcaaaaagacgaggaattggga
ttttctaattccgatattcaaaattgtgaggatgatatgcatgatacagtttga
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