Bombus terrestris (buff-tailed bumblebee): 100647119
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Entry
100647119 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100647119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100647119
03009 Ribosome biogenesis [BR:
bter03009
]
100647119
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100647119
Spliceosome [BR:
bter03041
]
Complex A
U1 snRNP components
U1 related factors
100647119
Complex B
100647119
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
Pre-60S particles
Helicases
100647119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100647119
NCBI-ProteinID:
XP_003400944
UniProt:
A0A9B0F5T4
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All DBs
Position
14:complement(10343310..10347755)
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AA seq
605 aa
AA seq
DB search
MFNRDRDHNRACRGGSGRGNNKGGSDSIRGNSINICGIRGRGTTNNIRGIVKNKQPGGAL
RKINWDVRSLEPLRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNF
PPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPR
LGNGDGPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEVRALAEDFLTDYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKE
NKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVA
ARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLR
EAGQNINPRLTEMAELAKSGSYGSRSGKRFMSNDRSNTRRGNTDTRGRGGSTRGRGRGGN
SYQSTSNNYSNSDYNSYNNMRQSNSTNQNTGYGYTQRTYGQSNLTPSYGGGDNYGSTYQY
RGTTY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgagacagagatcacaatagagcctgcagaggtggtagtggcagaggtaac
aataaaggaggtagtgatagtattcgtggtaatagcattaatatatgcggtatacgtggt
agaggcactactaataatatcagaggtattgtaaaaaacaaacaacctggaggagctctt
agaaaaatcaattgggatgtgagatctttagaacctttgcgcaaagatttttatattgaa
catcctacagtaagaagcagatcaaaagaagaagtatgccaattcagagaaaatgcagaa
ataactataaaaggtgacaatatacctaatcctattcaatattttgaggaaggaaacttc
ccaccttatgtattggatgaaatacataaacagggatattctcaacctacagcaattcaa
gcacaaggatggcctattgcacttagtggcagagatttagttgctattgcacaaactggc
tctggaaaaacgctaggatatgttttaccagcaattgttcacatcatacatcaaccacgt
cttggtaatggagatggtccaattgctttaatcttagctcctacaagagaattagcccaa
caaattcaggaagtagctaattgtttcggagaagcagcaggtgtaagaaatacctgtatc
tttggtggtgcacccaaaggcccacaggcacatgatttagaaagaggtgttgaaatatgt
attgctacaccaggtagacttatcgatttcttggaaagaggaactacaaatttacgcaga
tgcacatatttagtattagatgaagctgatagaatgttggatatgggttttgaacctcaa
ataagaaagataattgaacaaattcgacctgatagacaggttttgatgtggtcagctaca
tggcctaaagaagttcgtgcattagctgaagactttttgactgactatacacatcttaat
attggttctctgaccttatcagctaatcataatattattcaaattgtggatgtttgccag
gagtttgaaaaagatttaaaattatatagactacttcaagaaattggaaatgaaaaagaa
aataaaacaataatttttgttgaaacaaaacgaaaagtagatgatataacaagaaatatc
aggcgagatggatggcaagcattgagtattcatggcgataaaaatcaacaagaaagagat
catgtattacaggaatttaaaagtggaagagctcctattttagttgcaacagacgtagct
gctagaggcttagatgtggatgatgttaaatatgtaataaactttgattatccatcatcg
tcagaagattacatacatagaattggtcgtactggacgaagaagacaaactggtaccgct
tatgcattctttacaactcataacatgaaacatgcaggagatttaatagaggtattaaga
gaagcaggacaaaatataaatccacgacttactgaaatggcagagttagctaaatcagga
agttatggaagcagaagtggcaaacgatttatgagcaatgacagaagtaatactagacga
ggtaataccgataccagaggaagaggtggttctacgagaggaagaggtcgtggtggaaat
tcttatcaatctacttcaaacaattattcaaattcggattacaatagctataacaatatg
agacaaagtaattcaactaatcagaatacagggtatgggtatacacagagaacttatggg
caaagcaatttaactccaagttatggaggaggagataattatggaagtacttatcagtat
agaggaacaacatactaa
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