Bombus terrestris (buff-tailed bumblebee): 100647455
Help
Entry
100647455 CDS
T04364
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bter03021
]
100647455
03041 Spliceosome [BR:
bter03041
]
100647455
Transcription machinery [BR:
bter03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100647455
Spliceosome [BR:
bter03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100647455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100647455
NCBI-ProteinID:
XP_012164425
UniProt:
A0A9B2JMD3
LinkDB
All DBs
Position
5:complement(741982..754836)
Genome browser
AA seq
1488 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQAVNTNGTLNASATNNVSNTATSVKTPPLTAKNAVK
DQKLFSSAKPIDPAWLAQTKIETANIVNANKLLGQSNSAQMDVSFLDQLQHLQQLLLKKQ
ESTNEQKSSVKFDKKLLDFDYGEEEDDDVVVASSPAATAGSNTGQHNTVSTGNSLESLGL
LLTNPEVLRQLQTLQQTMQGSTSSSQHETEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFA
SECELKPSDILKPSQQNTYTTNVSSGVIQDMSQPPPGYPPALPYASQPLSNIRQINQQAH
QNQKSPLLDERQDTQDYSGNGARRDSSSVEIVNCENTRSQSRSPDRYRHHSRSRSPRHRD
RDRDRDRDRDRDRDRDRDRKSRSRSRSRRRRSRSRDRGRDRKREDSREKMTEEEREKERE
RRKRGLPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFIC
MNRRQDAYRALTKLKNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLVNV
TDQDLELLEEGGMIDEDTLPPNLKGKLKHSGANADVLQQQLQLQQQALVAAAGIPNLADG
IVNVMQPSTSAQQQQSQQQTSQQGQQQQQVIDTSQPPPIRPPTSAALLPPPNTQLQMMPP
AFTMPGVPRMIGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPPVNSPFGAG
VGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTTETGMPNLPMLRQPYGVGPSA
PLQMQLPQQQHSADDMDVEMEDAMPQSSNGAKNKSNLTEQQLSQNEERAESDQQVEHRDY
KERERDRENRERRDRETHLSHRDREGTDSRMDRGRDRGRGRDRGRDRRRDLRDRDRDDRR
ERENRENREGNPQTQTLQENETTPKKDGKPSLADRLRQLADGTLPLEDRVDRIIPRNRQE
RDRSDRNFDDSRSTRGEPLSSLMDLPKFGLPQERGDFPARPPDFRNPQDPREYQQQRDRQ
SFGRGHRGSQIHEEFMDVPRLQGGIYQEEFDNRIHGQQRVEEFGRLGSLREQREEFDRSE
VRGRRPLDDRDRFDYEIRRDGFDPRLQDGFDPRGHLDRGDFEPRRREFFGIDPIFGMPPI
MGPRGPRPGHPDGFGPRPAPLGARGPGPLMFHPRGLGPRPLRPGMRPFGPRGPPFDPREP
DAFFRPPFDDIRPHVRPPFGPMGPPSIIPPESAAPWRNQELPPSSWPSDSENHSQRDNLR
DKKGGNKHPNNMERENRNRGRKSRWTNVSPSGEEIEESKEQESTSANVEGKEEPAKEEEV
AVKEEVKEEIDMKEAISSERKEELVETVETKEEGIEMKKEEEEDCRDS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttaaggcatttaacgcagagctctcagctctgtatgatgttaaaccacca
atttcgaaagctaagatgaattctttaactagaggtgcaattaaggcaattaaattctat
aaacatgttgtgcaaagtgtcgagaaattcattcaaaaatgtaagccagagtacaaagtg
cctggattgtacgttatagattcaatcgtacgtcagtccagacaccaatttggggtagag
aaagatgtctttgctccacgctttgccaagaacatgcaaaccactttcttaaatcttttg
aagtgccctcaggaagataaaagcaaagtaataagagttttaaatctttggcagaagaat
gcagtgttcccttcagaggttatacagcccttatttgatcttgcggatccaaatcatcca
atacataaggagcaagcagttaataccaatggtacactgaatgcgtctgcaacaaataat
gttagtaacactgcaacttctgtaaagacaccccctttgactgcaaaaaatgcggtaaag
gatcaaaaattattttcttccgcaaagccaatcgatcctgcttggcttgcacaaacaaaa
atagaaacagcaaatatagttaatgctaataaacttttagggcaatcgaattcagctcaa
atggatgtttctttccttgatcagttacaacatttacagcagttattattaaaaaagcag
gagtccacaaatgaacagaaaagttctgtaaaatttgataaaaagctcttagattttgat
tatggcgaggaagaggatgatgatgttgttgttgctagttcaccagcagcgaccgcagga
tctaatactggtcaacacaatacagtttcaacaggaaatagtttggagagtcttggactt
cttttaacaaatccagaggttttgagacaacttcaaacattacaacaaacaatgcaggga
agtacttcttcatcacagcacgaaacagaagaaaagatgcggaaacttcagcaaatgaaa
cagcaagaggaagaatttgataaacatctagctcaaactgttcctaacttaccatttgca
tctgaatgtgaattaaagccatcagacattttgaaaccaagtcaacaaaatacctatacg
acaaatgtaagtagcggagtcatacaagatatgagtcaaccacctcctggttatccaccg
gctctaccgtatgcctctcaacctttatcaaatattaggcagataaatcagcaagcgcat
caaaatcaaaagagtccacttcttgacgaacggcaggacacgcaagattattctggaaat
ggtgcaaggcgagatagtagcagtgtagaaattgtaaattgtgaaaatacaagatcacag
agtagatcgcctgatcgatacagacatcacagtcgatctagatcaccacgacacagagat
agggatagagatagagatagggatagggacagggatcgagatcgagacagagatagaaaa
tctcgatcaagaagcagatctaggagaagaaggtctcgttcaagagacagaggtcgtgac
agaaaacgggaggatagtcgagaaaagatgactgaggaagaacgagaaaaagaaagagaa
aggcgtaaacgaggattaccaccaattgtgagagataaattaagtgtttgtagtacaacc
ctttgggtgggacatctatcgaaattagtacaccaagaagaactttcagatacttttgga
gaatttggtgatattgtcagtatagatttaatttcacccagaggttgtgcttttatatgc
atgaatagaaggcaagatgcatatagggctcttactaagcttaaaaatcataaaatgcaa
ggaaaggcaatcactttagcttgggctccaggaaaaggagtgaaaggaaaagaatggaaa
gattattgggaagttgaattaggagttagttatattccttggaataaattagttaatgtt
actgatcaagatttagaattattagaagaaggaggtatgattgacgaagacactctaccg
cccaatctaaaaggtaaattaaagcattccggagcaaatgcagatgtacttcaacaacag
ctgcaattgcaacagcaagcattagttgcagctgctggaattccaaatttggcggatggt
attgtaaatgtaatgcaaccttcaactagtgctcaacagcaacaatcccagcaacaaact
tcacaacaaggtcaacagcagcaacaagtaatcgatacaagtcaacctccaccaattaga
ccccctacatcagctgctcttttaccgccaccaaatacacaattacagatgatgccacct
gcttttacaatgccgggagttcctcgtatgattggaccaatgggattaccaatggcacat
agtttaatgccgaatgttcccataggtgtgccacctccaaatatgcaaagtttattaggg
ccaccgggaatgatgcaaactatgttaacgccacctgtaaattctccatttggagcaggt
gttggcgttggcttattaactcaaattcctttaccagctccagctgcaccttctgataaa
cctaattctactggtatgccacataatgttcctccaataggagttcctccgccaacaacg
gaaacaggtatgccaaatttaccaatgttacgacaaccatatggtgtaggcccttctgca
cctttgcaaatgcaactacctcaacaacaacattctgctgatgacatggatgtagagatg
gaagacgcaatgccacaaagttcaaatggagcaaaaaataaaagtaatttaactgaacaa
caactttcacaaaatgaagaacgagcagaatctgatcaacaagtagagcatcgagattat
aaagaaagagagagagatcgtgaaaatagggaaagaagagacagagagacgcatttatct
cacagagatagggaaggtactgactctagaatggatcgcggaagagaccgaggtagaggg
agagataggggacgcgatcgtagaagagatcttagagatagagacagggatgacagaaga
gaaagggaaaaccgggaaaatcgagaaggaaatccacagactcaaactcttcaggaaaac
gaaactactccaaaaaaagatgggaaaccaagcttagctgatcgtttgcgtcaattggct
gatggcacactgccacttgaagatcgtgtcgatcgaataatacctcgtaatcgccaggaa
cgagatagatccgacagaaattttgatgattctcgatcgactcgtggagaacccctttct
tctttaatggatttgccaaagtttggtttacctcaagaaagaggtgattttccagctcga
ccaccagattttcgtaatccgcaagatccgagagaatatcagcagcaaagagatagacaa
agtttcggaagaggtcataggggatcacagatacacgaggaatttatggatgttccaaga
ttgcaaggaggaatatatcaagaggaatttgataatagaatacatggacaacaaagagta
gaagaatttggaagacttggatcactcagagaacaaagggaggaatttgataggtctgaa
gtacgaggaagaagaccactcgatgatcgggaccggttcgattatgaaattaggcgagat
ggttttgatccacggcttcaagatggtttcgacccaaggggacacctcgaccggggtgat
tttgaacctagaaggcgagaattctttggaattgatcctatttttgggatgccgccaata
atgggacctagaggacctagacctggacatcctgatgggtttggaccacggccagccccc
ttaggagctcgtggaccaggtccattaatgttccatccacgaggtttgggacctcgtccc
cttcgtcctggtatgaggccttttggccctcgtgggccaccttttgatccccgagagccg
gatgcctttttcagaccaccttttgatgatattcgtccccatgtaagaccacctttcggt
cctatgggtccgccatccattattcctccagagtctgctgctccctggagaaatcaggaa
cttccgcctagttcctggccttccgattcagagaatcactcgcaaagggataatcttaga
gacaaaaaaggtggtaataaacatccgaataacatggaaagagaaaatcgaaatagggga
cgaaaatctagatggactaatgttagtccatctggagaggaaattgaagaatcaaaagaa
caagaatcaacctctgcgaatgttgaaggaaaagaagaacctgcaaaggaagaagaagta
gctgtgaaagaagaagtgaaagaagaaattgatatgaaggaagcaatctctagtgaacgg
aaggaagaattagtagaaacggttgagacaaaagaagaaggcattgaaatgaagaaggag
gaagaagaggattgcagggattcttag
DBGET
integrated database retrieval system
