Bombus terrestris (buff-tailed bumblebee): 100647746
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Entry
100647746 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100647746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100647746
03009 Ribosome biogenesis [BR:
bter03009
]
100647746
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100647746
Spliceosome [BR:
bter03041
]
Complex A
U1 snRNP components
U1 related factors
100647746
Complex B
100647746
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
Pre-60S particles
Helicases
100647746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Cac1_C
HPIP_like
Motif
Other DBs
NCBI-GeneID:
100647746
NCBI-ProteinID:
XP_012169196
UniProt:
A0A9B2JTR7
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All DBs
Position
11:complement(8398922..8404807)
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AA seq
533 aa
AA seq
DB search
MLRHVMGAIGSLRIRTYGASYHGGNYRTKERGSVYGNNANNRNGRFENRNKNNMHGTIGG
LKKPNWSFENLKPFKKDFYIPHPNVQSRHPQEIDTFRQENQITLKGEKIPNPIQHFEEGN
FPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQ
PLNRGDGPIALVLAPTRELAQQIQKVTYNFGYVRSTCIFGGAPKGNQARDLEHGVEICIA
TPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVCEEHEKQAKLQDLLQEISNVSPEG
GKTIIFVETKKKVESITKTIRRCGWPAVCIHGDKSQLERDFVLTEFRRNKDSILVATDVA
ARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTPQNSRQAKGLINVLK
EAKQVINPKLMELADRTGNDLARNRWGYGNYRRRETTFPKTHKRFDNLSYFDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacatgtaatgggagctattggatccctgagaattaggacatatggagctagt
tatcatggtggaaactatagaacaaaagaaaggggatctgtatatggaaataatgctaat
aacagaaatggacgatttgaaaatcgcaacaaaaataatatgcatggcaccattggaggc
ttaaaaaaaccaaactggagttttgaaaatttaaagccttttaaaaaagatttttatata
ccacatcctaatgttcaatcacgtcatccacaagaaatagatacatttagacaagagaat
cagattactcttaagggagaaaaaattcctaatcctatacaacattttgaagaaggaaat
tttcctgatcatgtaatgcaatgtattagaaagcaaggatttagtgaaccaactgctatt
caagctcaaggatggccaattgcaatgtctggacaaaatatggttggaatagcacaaact
ggatctgggaaaactttaggatacatcctacctgcaattgtacatattagcagtcaacaa
ccattaaatcgtggtgatgggccaattgctctagttctagcaccaacaagagaattggca
cagcaaattcagaaagttacttataattttggctatgtaagaagcacttgtatttttggt
ggtgcgccaaaaggaaaccaagctcgcgatttagaacacggagttgagatttgcattgcc
acaccaggacgactaattgactttttggaacgaggtataactaatttacgtaggtgtacg
tacttggtattagatgaagcagatagaatgctagacatgggttttgaacctcaaattcga
aaaattattgaacaaattaggccagatagacaggtattgatgtggtctgcaacttggccg
aaagaagttagaaatcttgcagaggaataccttgtagactatacacaattgaacattgga
tcattaacattatcagctaatcacaatattcttcagattgttgatgtctgtgaagaacat
gaaaaacaagcaaaattgcaagatcttcttcaagagattagtaatgttagtccagaaggt
gggaagacaataatttttgtagaaacaaagaaaaaggtggagagtattactaaaactatt
cgtcgatgtgggtggccagcagtatgtatacatggcgacaagtcgcaattagaaagagat
tttgttcttacagaatttagaagaaataaggattcaattcttgtagcaacagatgttgct
gctcgtggattggatgtcgacgatgtaaagtacgtgatcaacttcgattatccaacttca
tctgaagactacattcatagaattggtagaacgggccgatcaaataattcaggcacgagt
tatgccttctttacaccacaaaatagccgacaggctaaaggtttaattaatgtacttaag
gaagctaaacaagttatcaatccaaaacttatggaacttgcagacagaactggaaatgat
cttgcacgaaatcgttggggctatggaaattatcgcagaagagaaactactttccctaaa
acacataaacgattcgataatctaagttactttgacgcgtag
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